Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 AC073869.1-201ENST00000415574 2762 ntBASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 RPS24-214ENST00000613865 538 ntTSL 5 BASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 MIR6869-201ENST00000619434 62 ntBASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UPF3BQ9BZI7 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
UPF3BQ9BZI7 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPF3BQ9BZI7 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPF3BQ9BZI7 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
UPF3BQ9BZI7 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC17.17■□□□□ 0.34
UPF3BQ9BZI7 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
UPF3BQ9BZI7 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPF3BQ9BZI7 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPF3BQ9BZI7 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
UPF3BQ9BZI7 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPF3BQ9BZI7 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPF3BQ9BZI7 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPF3BQ9BZI7 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
UPF3BQ9BZI7 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
UPF3BQ9BZI7 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17.17■□□□□ 0.34
UPF3BQ9BZI7 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.17■□□□□ 0.34
UPF3BQ9BZI7 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPF3BQ9BZI7 USP17L6P-201ENST00000382470 1197 ntBASIC17.17■□□□□ 0.34
UPF3BQ9BZI7 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.17■□□□□ 0.34
UPF3BQ9BZI7 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.17■□□□□ 0.34
UPF3BQ9BZI7 KLF2P4-201ENST00000451959 1225 ntBASIC17.17■□□□□ 0.34
UPF3BQ9BZI7 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC17.17■□□□□ 0.34
UPF3BQ9BZI7 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
UPF3BQ9BZI7 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
UPF3BQ9BZI7 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC17.17■□□□□ 0.34
UPF3BQ9BZI7 BAP1-211ENST00000615113 489 ntBASIC17.17■□□□□ 0.34
UPF3BQ9BZI7 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPF3BQ9BZI7 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPF3BQ9BZI7 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC17.17■□□□□ 0.34
UPF3BQ9BZI7 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPF3BQ9BZI7 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC17.17■□□□□ 0.34
UPF3BQ9BZI7 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
UPF3BQ9BZI7 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPF3BQ9BZI7 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17.17■□□□□ 0.34
UPF3BQ9BZI7 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC17.16■□□□□ 0.34
UPF3BQ9BZI7 AC015818.8-201ENST00000587907 1519 ntBASIC17.16■□□□□ 0.34
UPF3BQ9BZI7 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UPF3BQ9BZI7 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
UPF3BQ9BZI7 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UPF3BQ9BZI7 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UPF3BQ9BZI7 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UPF3BQ9BZI7 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UPF3BQ9BZI7 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
UPF3BQ9BZI7 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC17.16■□□□□ 0.34
UPF3BQ9BZI7 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC17.16■□□□□ 0.34
UPF3BQ9BZI7 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC17.16■□□□□ 0.34
UPF3BQ9BZI7 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
UPF3BQ9BZI7 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UPF3BQ9BZI7 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC17.16■□□□□ 0.34
UPF3BQ9BZI7 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC17.16■□□□□ 0.34
UPF3BQ9BZI7 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UPF3BQ9BZI7 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms