Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC17.34■□□□□ 0.37
RPAP1Q9BWH6 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RPAP1Q9BWH6 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPAP1Q9BWH6 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RPAP1Q9BWH6 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPAP1Q9BWH6 TUBB8P4-201ENST00000511806 1324 ntBASIC17.34■□□□□ 0.37
RPAP1Q9BWH6 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPAP1Q9BWH6 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RPAP1Q9BWH6 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RPAP1Q9BWH6 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RPAP1Q9BWH6 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.37
RPAP1Q9BWH6 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RPAP1Q9BWH6 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RPAP1Q9BWH6 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RPAP1Q9BWH6 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RPAP1Q9BWH6 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
RPAP1Q9BWH6 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
RPAP1Q9BWH6 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
RPAP1Q9BWH6 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC17.33■□□□□ 0.36
RPAP1Q9BWH6 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RPAP1Q9BWH6 AL355334.1-201ENST00000417713 215 ntBASIC17.33■□□□□ 0.36
RPAP1Q9BWH6 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC17.33■□□□□ 0.36
RPAP1Q9BWH6 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC17.33■□□□□ 0.36
RPAP1Q9BWH6 CHCHD2P9-201ENST00000461726 456 ntBASIC17.33■□□□□ 0.36
RPAP1Q9BWH6 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC17.33■□□□□ 0.36
RPAP1Q9BWH6 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RPAP1Q9BWH6 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RPAP1Q9BWH6 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
RPAP1Q9BWH6 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RPAP1Q9BWH6 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
RPAP1Q9BWH6 RPL17P45-201ENST00000586289 509 ntBASIC17.33■□□□□ 0.36
RPAP1Q9BWH6 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
RPAP1Q9BWH6 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC17.33■□□□□ 0.36
RPAP1Q9BWH6 AL022334.2-201ENST00000610000 484 ntBASIC17.33■□□□□ 0.36
RPAP1Q9BWH6 MIR6842-201ENST00000612539 65 ntBASIC17.33■□□□□ 0.36
RPAP1Q9BWH6 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RPAP1Q9BWH6 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RPAP1Q9BWH6 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RPAP1Q9BWH6 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RPAP1Q9BWH6 KRT18P9-201ENST00000604826 1300 ntBASIC17.33■□□□□ 0.36
RPAP1Q9BWH6 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
RPAP1Q9BWH6 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC17.33■□□□□ 0.36
RPAP1Q9BWH6 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RPAP1Q9BWH6 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RPAP1Q9BWH6 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
RPAP1Q9BWH6 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC17.33■□□□□ 0.36
RPAP1Q9BWH6 TNN-203ENST00000622870 3719 ntTSL 5 BASIC17.33■□□□□ 0.36
RPAP1Q9BWH6 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RPAP1Q9BWH6 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.32■□□□□ 0.36
RPAP1Q9BWH6 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPAP1Q9BWH6 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPAP1Q9BWH6 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RPAP1Q9BWH6 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPAP1Q9BWH6 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPAP1Q9BWH6 MAPT-IT1-201ENST00000624111 3016 ntBASIC17.32■□□□□ 0.36
RPAP1Q9BWH6 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPAP1Q9BWH6 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC17.32■□□□□ 0.36
RPAP1Q9BWH6 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RPAP1Q9BWH6 AL512430.1-201ENST00000392575 860 ntBASIC17.32■□□□□ 0.36
RPAP1Q9BWH6 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RPAP1Q9BWH6 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPAP1Q9BWH6 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC17.32■□□□□ 0.36
RPAP1Q9BWH6 RPSAP15-201ENST00000448168 861 ntBASIC17.32■□□□□ 0.36
RPAP1Q9BWH6 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC17.32■□□□□ 0.36
RPAP1Q9BWH6 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RPAP1Q9BWH6 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC17.32■□□□□ 0.36
RPAP1Q9BWH6 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC17.32■□□□□ 0.36
RPAP1Q9BWH6 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPAP1Q9BWH6 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC17.32■□□□□ 0.36
RPAP1Q9BWH6 AC090386.2-201ENST00000623010 1039 ntBASIC17.32■□□□□ 0.36
RPAP1Q9BWH6 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC17.32■□□□□ 0.36
RPAP1Q9BWH6 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPAP1Q9BWH6 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RPAP1Q9BWH6 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPAP1Q9BWH6 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPAP1Q9BWH6 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPAP1Q9BWH6 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPAP1Q9BWH6 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPAP1Q9BWH6 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RPAP1Q9BWH6 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPAP1Q9BWH6 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RPAP1Q9BWH6 AC105206.1-202ENST00000314927 2368 ntBASIC17.32■□□□□ 0.36
RPAP1Q9BWH6 AC023794.5-201ENST00000564380 2157 ntBASIC17.32■□□□□ 0.36
RPAP1Q9BWH6 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RPAP1Q9BWH6 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC17.32■□□□□ 0.36
RPAP1Q9BWH6 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
RPAP1Q9BWH6 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC17.32■□□□□ 0.36
RPAP1Q9BWH6 AC130686.1-201ENST00000622936 2466 ntBASIC17.32■□□□□ 0.36
RPAP1Q9BWH6 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPAP1Q9BWH6 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPAP1Q9BWH6 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RPAP1Q9BWH6 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPAP1Q9BWH6 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPAP1Q9BWH6 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC17.31■□□□□ 0.36
RPAP1Q9BWH6 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RPAP1Q9BWH6 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RPAP1Q9BWH6 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RPAP1Q9BWH6 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC17.31■□□□□ 0.36
RPAP1Q9BWH6 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RPAP1Q9BWH6 BANF1P3-201ENST00000412556 261 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms