Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATP6V0A1Q93050 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATP6V0A1Q93050 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC16.04■□□□□ 0.16
ATP6V0A1Q93050 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATP6V0A1Q93050 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATP6V0A1Q93050 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATP6V0A1Q93050 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC16.04■□□□□ 0.16
ATP6V0A1Q93050 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATP6V0A1Q93050 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATP6V0A1Q93050 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC16.04■□□□□ 0.16
ATP6V0A1Q93050 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATP6V0A1Q93050 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
ATP6V0A1Q93050 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATP6V0A1Q93050 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATP6V0A1Q93050 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATP6V0A1Q93050 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 KRT17P5-201ENST00000332088 839 ntBASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 FTH1P22-201ENST00000456305 520 ntBASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 DNM1P30-201ENST00000563586 452 ntBASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 AC087392.5-201ENST00000612517 489 ntBASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 WT1-AS_6.1-201ENST00000614919 121 ntBASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 AC009560.1-201ENST00000620208 434 ntBASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 BX640514.1-201ENST00000583223 1918 ntBASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATP6V0A1Q93050 AL365209.1-201ENST00000624418 6473 ntBASIC16.02■□□□□ 0.16
ATP6V0A1Q93050 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
ATP6V0A1Q93050 MARK2P16-201ENST00000605714 1723 ntBASIC16.02■□□□□ 0.16
ATP6V0A1Q93050 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
ATP6V0A1Q93050 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP6V0A1Q93050 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP6V0A1Q93050 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ATP6V0A1Q93050 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP6V0A1Q93050 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP6V0A1Q93050 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ATP6V0A1Q93050 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
ATP6V0A1Q93050 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP6V0A1Q93050 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.02■□□□□ 0.16
ATP6V0A1Q93050 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
ATP6V0A1Q93050 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP6V0A1Q93050 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
ATP6V0A1Q93050 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP6V0A1Q93050 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC16.02■□□□□ 0.16
ATP6V0A1Q93050 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC16.02■□□□□ 0.16
ATP6V0A1Q93050 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
ATP6V0A1Q93050 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ATP6V0A1Q93050 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC16.02■□□□□ 0.16
ATP6V0A1Q93050 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC16.02■□□□□ 0.16
ATP6V0A1Q93050 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC16.02■□□□□ 0.16
ATP6V0A1Q93050 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC16.02■□□□□ 0.16
ATP6V0A1Q93050 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC16.02■□□□□ 0.16
ATP6V0A1Q93050 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ATP6V0A1Q93050 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC16.02■□□□□ 0.16
ATP6V0A1Q93050 RPL17P45-201ENST00000586289 509 ntBASIC16.02■□□□□ 0.16
ATP6V0A1Q93050 AP001065.2-201ENST00000617205 644 ntBASIC16.02■□□□□ 0.16
ATP6V0A1Q93050 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.02■□□□□ 0.16
ATP6V0A1Q93050 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC16.02■□□□□ 0.16
ATP6V0A1Q93050 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ATP6V0A1Q93050 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATP6V0A1Q93050 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ATP6V0A1Q93050 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
ATP6V0A1Q93050 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ATP6V0A1Q93050 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms