Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AC005225.4-201ENST00000557330 545 ntBASIC12.77□□□□□ -0.37
LINC00346Q8IVM7 APOC4-201ENST00000591600 348 ntTSL 3 BASIC12.77□□□□□ -0.37
LINC00346Q8IVM7 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC12.77□□□□□ -0.37
LINC00346Q8IVM7 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
LINC00346Q8IVM7 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00346Q8IVM7 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.77□□□□□ -0.37
LINC00346Q8IVM7 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00346Q8IVM7 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
LINC00346Q8IVM7 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
LINC00346Q8IVM7 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00346Q8IVM7 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.77□□□□□ -0.37
LINC00346Q8IVM7 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
LINC00346Q8IVM7 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
LINC00346Q8IVM7 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00346Q8IVM7 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00346Q8IVM7 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00346Q8IVM7 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
LINC00346Q8IVM7 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 AC105206.1-202ENST00000314927 2368 ntBASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 CICP17-201ENST00000418553 2377 ntBASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 USP17L6P-201ENST00000382470 1197 ntBASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 KLF2P4-201ENST00000451959 1225 ntBASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 AC100850.1-201ENST00000506768 649 ntBASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 AC132192.2-201ENST00000596206 1147 ntBASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 AC012645.4-201ENST00000610691 1061 ntBASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 RPS24-214ENST00000613865 538 ntTSL 5 BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 AL008718.2-201ENST00000609206 1313 ntBASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00346Q8IVM7 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms