Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZC3H6P61129 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZC3H6P61129 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ZC3H6P61129 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZC3H6P61129 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ZC3H6P61129 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZC3H6P61129 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZC3H6P61129 AC015909.5-201ENST00000624336 2266 ntBASIC18.84■□□□□ 0.61
ZC3H6P61129 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZC3H6P61129 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZC3H6P61129 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZC3H6P61129 ABCD1P4-201ENST00000399687 604 ntBASIC18.84■□□□□ 0.61
ZC3H6P61129 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC18.84■□□□□ 0.61
ZC3H6P61129 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC18.84■□□□□ 0.61
ZC3H6P61129 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC18.84■□□□□ 0.61
ZC3H6P61129 AL049840.2-201ENST00000602722 535 ntBASIC18.84■□□□□ 0.61
ZC3H6P61129 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC18.84■□□□□ 0.61
ZC3H6P61129 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
ZC3H6P61129 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZC3H6P61129 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.84■□□□□ 0.61
ZC3H6P61129 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ZC3H6P61129 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC18.84■□□□□ 0.61
ZC3H6P61129 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZC3H6P61129 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZC3H6P61129 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZC3H6P61129 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.84■□□□□ 0.61
ZC3H6P61129 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC18.84■□□□□ 0.61
ZC3H6P61129 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZC3H6P61129 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
ZC3H6P61129 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC18.84■□□□□ 0.61
ZC3H6P61129 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC18.83■□□□□ 0.61
ZC3H6P61129 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZC3H6P61129 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ZC3H6P61129 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZC3H6P61129 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
ZC3H6P61129 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
ZC3H6P61129 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
ZC3H6P61129 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
ZC3H6P61129 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZC3H6P61129 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC18.83■□□□□ 0.61
ZC3H6P61129 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
ZC3H6P61129 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZC3H6P61129 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC18.83■□□□□ 0.6
ZC3H6P61129 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZC3H6P61129 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
ZC3H6P61129 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZC3H6P61129 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
ZC3H6P61129 RPS18P9-201ENST00000482817 460 ntBASIC18.83■□□□□ 0.6
ZC3H6P61129 GOLGA2P8-201ENST00000505201 779 ntBASIC18.83■□□□□ 0.6
ZC3H6P61129 BCRP4-201ENST00000506079 804 ntBASIC18.83■□□□□ 0.6
ZC3H6P61129 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC18.83■□□□□ 0.6
ZC3H6P61129 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC18.83■□□□□ 0.6
ZC3H6P61129 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC18.83■□□□□ 0.6
ZC3H6P61129 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC18.83■□□□□ 0.6
ZC3H6P61129 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZC3H6P61129 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
ZC3H6P61129 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ZC3H6P61129 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZC3H6P61129 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZC3H6P61129 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
ZC3H6P61129 TCAF2P1-201ENST00000291129 2421 ntBASIC18.83■□□□□ 0.6
ZC3H6P61129 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.83■□□□□ 0.6
ZC3H6P61129 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZC3H6P61129 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC18.83■□□□□ 0.6
ZC3H6P61129 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ZC3H6P61129 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
ZC3H6P61129 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZC3H6P61129 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZC3H6P61129 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ZC3H6P61129 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZC3H6P61129 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZC3H6P61129 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZC3H6P61129 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZC3H6P61129 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZC3H6P61129 SHMT1P1-201ENST00000419974 1312 ntBASIC18.82■□□□□ 0.6
ZC3H6P61129 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC18.82■□□□□ 0.6
ZC3H6P61129 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZC3H6P61129 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
ZC3H6P61129 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZC3H6P61129 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.82■□□□□ 0.6
ZC3H6P61129 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZC3H6P61129 CTSL-202ENST00000342020 933 ntTSL 2 BASIC18.82■□□□□ 0.6
ZC3H6P61129 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC18.82■□□□□ 0.6
ZC3H6P61129 AC004522.1-201ENST00000419978 654 ntBASIC18.82■□□□□ 0.6
ZC3H6P61129 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC18.82■□□□□ 0.6
ZC3H6P61129 HNRNPA1P21-201ENST00000424115 961 ntBASIC18.82■□□□□ 0.6
ZC3H6P61129 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC18.82■□□□□ 0.6
ZC3H6P61129 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC18.82■□□□□ 0.6
ZC3H6P61129 HNRNPA1P42-201ENST00000458678 957 ntBASIC18.82■□□□□ 0.6
ZC3H6P61129 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC18.82■□□□□ 0.6
ZC3H6P61129 BCL2L12P1-201ENST00000508390 733 ntBASIC18.82■□□□□ 0.6
ZC3H6P61129 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC18.82■□□□□ 0.6
ZC3H6P61129 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZC3H6P61129 MIR6074-201ENST00000612054 107 ntBASIC18.82■□□□□ 0.6
ZC3H6P61129 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC18.82■□□□□ 0.6
ZC3H6P61129 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC18.82■□□□□ 0.6
ZC3H6P61129 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZC3H6P61129 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
ZC3H6P61129 EML1-203ENST00000334192 4064 ntTSL 5 BASIC18.82■□□□□ 0.6
ZC3H6P61129 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms