Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
AP3S2P59780 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
AP3S2P59780 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
AP3S2P59780 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
AP3S2P59780 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC12.38□□□□□ -0.43
AP3S2P59780 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC12.38□□□□□ -0.43
AP3S2P59780 AC003958.1-201ENST00000435883 421 ntBASIC12.38□□□□□ -0.43
AP3S2P59780 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.38□□□□□ -0.43
AP3S2P59780 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC12.38□□□□□ -0.43
AP3S2P59780 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.38□□□□□ -0.43
AP3S2P59780 AC107373.2-201ENST00000607735 490 ntBASIC12.38□□□□□ -0.43
AP3S2P59780 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
AP3S2P59780 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
AP3S2P59780 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
AP3S2P59780 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
AP3S2P59780 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
AP3S2P59780 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
AP3S2P59780 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC12.38□□□□□ -0.43
AP3S2P59780 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
AP3S2P59780 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
AP3S2P59780 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
AP3S2P59780 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
AP3S2P59780 RAD1-203ENST00000382038 5770 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
AP3S2P59780 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
AP3S2P59780 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
AP3S2P59780 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
AP3S2P59780 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
AP3S2P59780 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
AP3S2P59780 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
AP3S2P59780 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
AP3S2P59780 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC12.38□□□□□ -0.43
AP3S2P59780 HSPA12A-201ENST00000369209 5722 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
AP3S2P59780 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
AP3S2P59780 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
AP3S2P59780 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
AP3S2P59780 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
AP3S2P59780 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.38□□□□□ -0.43
AP3S2P59780 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S2P59780 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC12.37□□□□□ -0.43
AP3S2P59780 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC12.37□□□□□ -0.43
AP3S2P59780 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S2P59780 DRD5P1-201ENST00000456605 1438 ntBASIC12.37□□□□□ -0.43
AP3S2P59780 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
AP3S2P59780 GFRA1-203ENST00000369236 9109 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S2P59780 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S2P59780 PDIA3P1-201ENST00000471856 1510 ntBASIC12.37□□□□□ -0.43
AP3S2P59780 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S2P59780 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.37□□□□□ -0.43
AP3S2P59780 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S2P59780 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S2P59780 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.37□□□□□ -0.43
AP3S2P59780 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S2P59780 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC12.37□□□□□ -0.43
AP3S2P59780 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S2P59780 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
AP3S2P59780 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S2P59780 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
AP3S2P59780 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
AP3S2P59780 GPR179-204ENST00000621958 7983 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
AP3S2P59780 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S2P59780 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S2P59780 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.37□□□□□ -0.43
AP3S2P59780 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S2P59780 RAD18-204ENST00000418463 563 ntTSL 4 BASIC12.37□□□□□ -0.43
AP3S2P59780 RAD18-205ENST00000421052 582 ntTSL 3 BASIC12.37□□□□□ -0.43
AP3S2P59780 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.37□□□□□ -0.43
AP3S2P59780 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.37□□□□□ -0.43
AP3S2P59780 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC12.37□□□□□ -0.43
AP3S2P59780 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S2P59780 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
AP3S2P59780 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC12.37□□□□□ -0.43
AP3S2P59780 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC12.37□□□□□ -0.43
AP3S2P59780 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.37□□□□□ -0.43
AP3S2P59780 AC005586.2-201ENST00000563946 837 ntBASIC12.37□□□□□ -0.43
AP3S2P59780 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC12.37□□□□□ -0.43
AP3S2P59780 COX5A-206ENST00000568783 571 ntTSL 3 BASIC12.37□□□□□ -0.43
AP3S2P59780 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.37□□□□□ -0.43
AP3S2P59780 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.37□□□□□ -0.43
AP3S2P59780 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S2P59780 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
AP3S2P59780 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC12.37□□□□□ -0.43
AP3S2P59780 CR392039.2-201ENST00000623182 509 ntBASIC12.37□□□□□ -0.43
AP3S2P59780 AP001002.3-201ENST00000623482 206 ntBASIC12.37□□□□□ -0.43
AP3S2P59780 BX539320.1-201ENST00000623759 877 ntBASIC12.37□□□□□ -0.43
AP3S2P59780 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S2P59780 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S2P59780 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S2P59780 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S2P59780 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
AP3S2P59780 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S2P59780 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S2P59780 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S2P59780 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC12.37□□□□□ -0.43
AP3S2P59780 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S2P59780 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC12.37□□□□□ -0.43
AP3S2P59780 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S2P59780 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S2P59780 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S2P59780 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP3S2P59780 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms