Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC16.7■□□□□ 0.26
RHBDL3P58872 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.7■□□□□ 0.26
RHBDL3P58872 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RHBDL3P58872 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RHBDL3P58872 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RHBDL3P58872 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
RHBDL3P58872 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RHBDL3P58872 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RHBDL3P58872 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC16.7■□□□□ 0.26
RHBDL3P58872 AC068418.2-201ENST00000577309 3703 ntBASIC16.7■□□□□ 0.26
RHBDL3P58872 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RHBDL3P58872 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RHBDL3P58872 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC16.7■□□□□ 0.26
RHBDL3P58872 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RHBDL3P58872 CTBP2P8-201ENST00000422584 1330 ntBASIC16.7■□□□□ 0.26
RHBDL3P58872 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.7■□□□□ 0.26
RHBDL3P58872 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.69■□□□□ 0.26
RHBDL3P58872 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
RHBDL3P58872 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RHBDL3P58872 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RHBDL3P58872 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC16.69■□□□□ 0.26
RHBDL3P58872 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RHBDL3P58872 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RHBDL3P58872 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RHBDL3P58872 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RHBDL3P58872 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RHBDL3P58872 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
RHBDL3P58872 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.69■□□□□ 0.26
RHBDL3P58872 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
RHBDL3P58872 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RHBDL3P58872 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RHBDL3P58872 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
RHBDL3P58872 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RHBDL3P58872 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
RHBDL3P58872 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
RHBDL3P58872 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RHBDL3P58872 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
RHBDL3P58872 AC073210.1-201ENST00000414799 232 ntBASIC16.69■□□□□ 0.26
RHBDL3P58872 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC16.69■□□□□ 0.26
RHBDL3P58872 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC16.69■□□□□ 0.26
RHBDL3P58872 REEP5-205ENST00000504247 480 ntTSL 5 BASIC16.69■□□□□ 0.26
RHBDL3P58872 PGAM1P12-201ENST00000505622 748 ntBASIC16.69■□□□□ 0.26
RHBDL3P58872 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC16.69■□□□□ 0.26
RHBDL3P58872 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RHBDL3P58872 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC16.69■□□□□ 0.26
RHBDL3P58872 COX5A-205ENST00000568517 582 ntTSL 3 BASIC16.69■□□□□ 0.26
RHBDL3P58872 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC16.69■□□□□ 0.26
RHBDL3P58872 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC16.69■□□□□ 0.26
RHBDL3P58872 AC002472.4-201ENST00000641915 272 ntBASIC16.69■□□□□ 0.26
RHBDL3P58872 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RHBDL3P58872 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RHBDL3P58872 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RHBDL3P58872 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.69■□□□□ 0.26
RHBDL3P58872 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RHBDL3P58872 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RHBDL3P58872 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RHBDL3P58872 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RHBDL3P58872 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RHBDL3P58872 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
RHBDL3P58872 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RHBDL3P58872 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RHBDL3P58872 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC16.69■□□□□ 0.26
RHBDL3P58872 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC16.68■□□□□ 0.26
RHBDL3P58872 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RHBDL3P58872 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
RHBDL3P58872 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC16.68■□□□□ 0.26
RHBDL3P58872 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RHBDL3P58872 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
RHBDL3P58872 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RHBDL3P58872 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RHBDL3P58872 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RHBDL3P58872 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RHBDL3P58872 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.68■□□□□ 0.26
RHBDL3P58872 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RHBDL3P58872 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.68■□□□□ 0.26
RHBDL3P58872 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RHBDL3P58872 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC16.68■□□□□ 0.26
RHBDL3P58872 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RHBDL3P58872 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
RHBDL3P58872 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
RHBDL3P58872 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC16.68■□□□□ 0.26
RHBDL3P58872 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC16.68■□□□□ 0.26
RHBDL3P58872 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RHBDL3P58872 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC16.68■□□□□ 0.26
RHBDL3P58872 AREG-202ENST00000502307 956 ntTSL 5 BASIC16.68■□□□□ 0.26
RHBDL3P58872 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC16.68■□□□□ 0.26
RHBDL3P58872 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC16.68■□□□□ 0.26
RHBDL3P58872 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC16.68■□□□□ 0.26
RHBDL3P58872 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
RHBDL3P58872 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC16.68■□□□□ 0.26
RHBDL3P58872 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC16.68■□□□□ 0.26
RHBDL3P58872 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC16.68■□□□□ 0.26
RHBDL3P58872 RN7SL556P-201ENST00000582856 298 ntBASIC16.68■□□□□ 0.26
RHBDL3P58872 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.68■□□□□ 0.26
RHBDL3P58872 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
RHBDL3P58872 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC16.68■□□□□ 0.26
RHBDL3P58872 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.68■□□□□ 0.26
RHBDL3P58872 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RHBDL3P58872 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RHBDL3P58872 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms