Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SLC25A1P53007 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
SLC25A1P53007 RCC2P1-201ENST00000452257 1476 ntBASIC12.77□□□□□ -0.37
SLC25A1P53007 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.77□□□□□ -0.37
SLC25A1P53007 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SLC25A1P53007 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
SLC25A1P53007 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
SLC25A1P53007 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SLC25A1P53007 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
SLC25A1P53007 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SLC25A1P53007 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
SLC25A1P53007 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
SLC25A1P53007 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SLC25A1P53007 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SLC25A1P53007 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.77□□□□□ -0.37
SLC25A1P53007 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.76□□□□□ -0.37
SLC25A1P53007 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SLC25A1P53007 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
SLC25A1P53007 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
SLC25A1P53007 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.76□□□□□ -0.37
SLC25A1P53007 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SLC25A1P53007 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SLC25A1P53007 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.76□□□□□ -0.37
SLC25A1P53007 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
SLC25A1P53007 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SLC25A1P53007 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SLC25A1P53007 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.76□□□□□ -0.37
SLC25A1P53007 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
SLC25A1P53007 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.76□□□□□ -0.37
SLC25A1P53007 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC12.76□□□□□ -0.37
SLC25A1P53007 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SLC25A1P53007 USP39-220ENST00000613444 2161 ntTSL 2 BASIC12.76□□□□□ -0.37
SLC25A1P53007 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
SLC25A1P53007 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SLC25A1P53007 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SLC25A1P53007 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SLC25A1P53007 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SLC25A1P53007 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
SLC25A1P53007 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SLC25A1P53007 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SLC25A1P53007 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
SLC25A1P53007 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC12.76□□□□□ -0.37
SLC25A1P53007 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC12.76□□□□□ -0.37
SLC25A1P53007 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
SLC25A1P53007 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SLC25A1P53007 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC12.76□□□□□ -0.37
SLC25A1P53007 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC12.76□□□□□ -0.37
SLC25A1P53007 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
SLC25A1P53007 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC12.76□□□□□ -0.37
SLC25A1P53007 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SLC25A1P53007 AC003686.1-201ENST00000550956 1034 ntBASIC12.76□□□□□ -0.37
SLC25A1P53007 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC12.76□□□□□ -0.37
SLC25A1P53007 AC140658.4-201ENST00000561990 352 ntBASIC12.76□□□□□ -0.37
SLC25A1P53007 AL596325.1-201ENST00000563991 1082 ntBASIC12.76□□□□□ -0.37
SLC25A1P53007 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC12.76□□□□□ -0.37
SLC25A1P53007 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
SLC25A1P53007 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC12.76□□□□□ -0.37
SLC25A1P53007 Z98259.2-201ENST00000641583 609 ntBASIC12.76□□□□□ -0.37
SLC25A1P53007 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SLC25A1P53007 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.76□□□□□ -0.37
SLC25A1P53007 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC12.76□□□□□ -0.37
SLC25A1P53007 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SLC25A1P53007 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SLC25A1P53007 CU639417.3-201ENST00000624240 1404 ntBASIC12.76□□□□□ -0.37
SLC25A1P53007 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
SLC25A1P53007 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SLC25A1P53007 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SLC25A1P53007 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.76□□□□□ -0.37
SLC25A1P53007 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SLC25A1P53007 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.76□□□□□ -0.37
SLC25A1P53007 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
SLC25A1P53007 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.76□□□□□ -0.37
SLC25A1P53007 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
SLC25A1P53007 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SLC25A1P53007 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SLC25A1P53007 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SLC25A1P53007 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.76□□□□□ -0.37
SLC25A1P53007 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.76□□□□□ -0.37
SLC25A1P53007 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.76□□□□□ -0.37
SLC25A1P53007 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SLC25A1P53007 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.76□□□□□ -0.37
SLC25A1P53007 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
SLC25A1P53007 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
SLC25A1P53007 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SLC25A1P53007 AL031595.1-201ENST00000623969 4709 ntBASIC12.76□□□□□ -0.37
SLC25A1P53007 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SLC25A1P53007 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SLC25A1P53007 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SLC25A1P53007 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SLC25A1P53007 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.75□□□□□ -0.37
SLC25A1P53007 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SLC25A1P53007 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SLC25A1P53007 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SLC25A1P53007 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SLC25A1P53007 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SLC25A1P53007 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SLC25A1P53007 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SLC25A1P53007 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SLC25A1P53007 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SLC25A1P53007 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms