Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HTR3AP46098 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.36□□□□□ -0.27
HTR3AP46098 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
HTR3AP46098 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HTR3AP46098 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
HTR3AP46098 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
HTR3AP46098 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HTR3AP46098 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.36□□□□□ -0.27
HTR3AP46098 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HTR3AP46098 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HTR3AP46098 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
HTR3AP46098 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HTR3AP46098 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
HTR3AP46098 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
HTR3AP46098 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HTR3AP46098 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC13.35□□□□□ -0.27
HTR3AP46098 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.35□□□□□ -0.27
HTR3AP46098 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
HTR3AP46098 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HTR3AP46098 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HTR3AP46098 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HTR3AP46098 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
HTR3AP46098 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HTR3AP46098 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
HTR3AP46098 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.35□□□□□ -0.27
HTR3AP46098 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HTR3AP46098 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HTR3AP46098 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.35□□□□□ -0.27
HTR3AP46098 AC215219.1-201ENST00000400706 1817 ntBASIC13.35□□□□□ -0.27
HTR3AP46098 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HTR3AP46098 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HTR3AP46098 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
HTR3AP46098 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HTR3AP46098 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.35□□□□□ -0.27
HTR3AP46098 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
HTR3AP46098 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.35□□□□□ -0.27
HTR3AP46098 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.35□□□□□ -0.27
HTR3AP46098 ACA64.2-201ENST00000459014 129 ntBASIC13.35□□□□□ -0.27
HTR3AP46098 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
HTR3AP46098 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HTR3AP46098 SORD2P-201ENST00000558556 1069 ntBASIC13.35□□□□□ -0.27
HTR3AP46098 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.35□□□□□ -0.27
HTR3AP46098 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
HTR3AP46098 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.35□□□□□ -0.27
HTR3AP46098 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.35□□□□□ -0.27
HTR3AP46098 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HTR3AP46098 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HTR3AP46098 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
HTR3AP46098 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
HTR3AP46098 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HTR3AP46098 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
HTR3AP46098 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC13.35□□□□□ -0.27
HTR3AP46098 SHC1P1-201ENST00000425230 1745 ntBASIC13.35□□□□□ -0.27
HTR3AP46098 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.35□□□□□ -0.27
HTR3AP46098 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HTR3AP46098 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HTR3AP46098 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC13.35□□□□□ -0.27
HTR3AP46098 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HTR3AP46098 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HTR3AP46098 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HTR3AP46098 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HTR3AP46098 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.34□□□□□ -0.27
HTR3AP46098 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HTR3AP46098 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
HTR3AP46098 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HTR3AP46098 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HTR3AP46098 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HTR3AP46098 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
HTR3AP46098 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.34□□□□□ -0.27
HTR3AP46098 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HTR3AP46098 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HTR3AP46098 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HTR3AP46098 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HTR3AP46098 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HTR3AP46098 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
HTR3AP46098 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HTR3AP46098 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HTR3AP46098 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HTR3AP46098 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HTR3AP46098 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HTR3AP46098 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.34□□□□□ -0.27
HTR3AP46098 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.34□□□□□ -0.27
HTR3AP46098 AC026954.1-201ENST00000429771 1293 ntBASIC13.34□□□□□ -0.27
HTR3AP46098 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
HTR3AP46098 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.34□□□□□ -0.27
HTR3AP46098 CICP12-201ENST00000455801 843 ntBASIC13.34□□□□□ -0.27
HTR3AP46098 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HTR3AP46098 AC027237.1-201ENST00000560942 655 ntBASIC13.34□□□□□ -0.27
HTR3AP46098 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.34□□□□□ -0.27
HTR3AP46098 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HTR3AP46098 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.34□□□□□ -0.27
HTR3AP46098 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HTR3AP46098 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.34□□□□□ -0.27
HTR3AP46098 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.34□□□□□ -0.27
HTR3AP46098 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HTR3AP46098 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
HTR3AP46098 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
HTR3AP46098 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HTR3AP46098 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC13.34□□□□□ -0.27
HTR3AP46098 AC016397.2-201ENST00000624848 1985 ntBASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms