Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 AL031673.1-201ENST00000611460 466 ntBASIC13.93□□□□□ -0.18
HOXA6P31267 GARS-210ENST00000627489 324 ntTSL 4 BASIC13.93□□□□□ -0.18
HOXA6P31267 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC13.93□□□□□ -0.18
HOXA6P31267 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.93□□□□□ -0.18
HOXA6P31267 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HOXA6P31267 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
HOXA6P31267 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.93□□□□□ -0.18
HOXA6P31267 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HOXA6P31267 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.93□□□□□ -0.18
HOXA6P31267 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.93□□□□□ -0.18
HOXA6P31267 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HOXA6P31267 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HOXA6P31267 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HOXA6P31267 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
HOXA6P31267 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
HOXA6P31267 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC13.93□□□□□ -0.18
HOXA6P31267 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HOXA6P31267 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
HOXA6P31267 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HOXA6P31267 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
HOXA6P31267 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HOXA6P31267 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HOXA6P31267 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HOXA6P31267 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
HOXA6P31267 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
HOXA6P31267 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HOXA6P31267 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HOXA6P31267 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.92□□□□□ -0.18
HOXA6P31267 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
HOXA6P31267 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC13.92□□□□□ -0.18
HOXA6P31267 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HOXA6P31267 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HOXA6P31267 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HOXA6P31267 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HOXA6P31267 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HOXA6P31267 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HOXA6P31267 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
HOXA6P31267 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC13.92□□□□□ -0.18
HOXA6P31267 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC13.92□□□□□ -0.18
HOXA6P31267 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HOXA6P31267 SOD2-205ENST00000444946 917 ntTSL 2 BASIC13.92□□□□□ -0.18
HOXA6P31267 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
HOXA6P31267 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC13.92□□□□□ -0.18
HOXA6P31267 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC13.92□□□□□ -0.18
HOXA6P31267 AC079414.2-201ENST00000567157 1104 ntBASIC13.92□□□□□ -0.18
HOXA6P31267 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC13.92□□□□□ -0.18
HOXA6P31267 MIR4254-201ENST00000581063 76 ntBASIC13.92□□□□□ -0.18
HOXA6P31267 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HOXA6P31267 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.92□□□□□ -0.18
HOXA6P31267 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HOXA6P31267 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HOXA6P31267 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HOXA6P31267 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HOXA6P31267 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
HOXA6P31267 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.92□□□□□ -0.18
HOXA6P31267 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.92□□□□□ -0.18
HOXA6P31267 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.92□□□□□ -0.18
HOXA6P31267 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HOXA6P31267 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HOXA6P31267 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC13.92□□□□□ -0.18
HOXA6P31267 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HOXA6P31267 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HOXA6P31267 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HOXA6P31267 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC13.91□□□□□ -0.18
HOXA6P31267 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.91□□□□□ -0.18
HOXA6P31267 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.91□□□□□ -0.18
HOXA6P31267 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC13.91□□□□□ -0.18
HOXA6P31267 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.91□□□□□ -0.18
HOXA6P31267 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HOXA6P31267 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HOXA6P31267 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
HOXA6P31267 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13.91□□□□□ -0.18
HOXA6P31267 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
HOXA6P31267 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC13.91□□□□□ -0.18
HOXA6P31267 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
HOXA6P31267 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HOXA6P31267 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HOXA6P31267 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HOXA6P31267 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC13.91□□□□□ -0.18
HOXA6P31267 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
HOXA6P31267 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
HOXA6P31267 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HOXA6P31267 ZNF877P-201ENST00000437614 612 ntBASIC13.91□□□□□ -0.18
HOXA6P31267 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HOXA6P31267 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC13.91□□□□□ -0.18
HOXA6P31267 CD81-209ENST00000492627 886 ntTSL 3 BASIC13.91□□□□□ -0.18
HOXA6P31267 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC13.91□□□□□ -0.18
HOXA6P31267 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC13.91□□□□□ -0.18
HOXA6P31267 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC13.91□□□□□ -0.18
HOXA6P31267 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC13.91□□□□□ -0.18
HOXA6P31267 AL359219.1-201ENST00000556311 934 ntBASIC13.91□□□□□ -0.18
HOXA6P31267 FAM187B2P-201ENST00000577135 713 ntBASIC13.91□□□□□ -0.18
HOXA6P31267 RN7SL602P-201ENST00000578326 324 ntBASIC13.91□□□□□ -0.18
HOXA6P31267 RN7SL718P-201ENST00000581254 303 ntBASIC13.91□□□□□ -0.18
HOXA6P31267 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
HOXA6P31267 NEK4P3-201ENST00000604859 544 ntBASIC13.91□□□□□ -0.18
HOXA6P31267 MIR8071-1-201ENST00000616769 65 ntBASIC13.91□□□□□ -0.18
HOXA6P31267 MIR8071-2-201ENST00000616772 65 ntBASIC13.91□□□□□ -0.18
HOXA6P31267 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
HOXA6P31267 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms