Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CYP3A4P08684 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CYP3A4P08684 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CYP3A4P08684 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CYP3A4P08684 SOD2-202ENST00000367054 815 ntTSL 2 BASIC15.98■□□□□ 0.15
CYP3A4P08684 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CYP3A4P08684 SAT1-201ENST00000379251 801 ntTSL 2 BASIC15.98■□□□□ 0.15
CYP3A4P08684 SAT1-202ENST00000379253 909 ntTSL 2 BASIC15.98■□□□□ 0.15
CYP3A4P08684 SAT1-203ENST00000379254 868 ntTSL 3 BASIC15.98■□□□□ 0.15
CYP3A4P08684 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CYP3A4P08684 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CYP3A4P08684 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC15.98■□□□□ 0.15
CYP3A4P08684 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC15.98■□□□□ 0.15
CYP3A4P08684 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC15.98■□□□□ 0.15
CYP3A4P08684 AK2P2-201ENST00000439142 405 ntBASIC15.98■□□□□ 0.15
CYP3A4P08684 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC15.98■□□□□ 0.15
CYP3A4P08684 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC15.98■□□□□ 0.15
CYP3A4P08684 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC15.98■□□□□ 0.15
CYP3A4P08684 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC15.98■□□□□ 0.15
CYP3A4P08684 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC15.98■□□□□ 0.15
CYP3A4P08684 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC15.98■□□□□ 0.15
CYP3A4P08684 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CYP3A4P08684 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CYP3A4P08684 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CYP3A4P08684 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CYP3A4P08684 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC15.98■□□□□ 0.15
CYP3A4P08684 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.98■□□□□ 0.15
CYP3A4P08684 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CYP3A4P08684 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CYP3A4P08684 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CYP3A4P08684 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.98■□□□□ 0.15
CYP3A4P08684 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CYP3A4P08684 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CYP3A4P08684 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CYP3A4P08684 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CYP3A4P08684 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CYP3A4P08684 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC15.98■□□□□ 0.15
CYP3A4P08684 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CYP3A4P08684 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC15.98■□□□□ 0.15
CYP3A4P08684 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CYP3A4P08684 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CYP3A4P08684 AC061965.1-201ENST00000560524 1465 ntBASIC15.97■□□□□ 0.15
CYP3A4P08684 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CYP3A4P08684 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CYP3A4P08684 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.97■□□□□ 0.15
CYP3A4P08684 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CYP3A4P08684 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CYP3A4P08684 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
CYP3A4P08684 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CYP3A4P08684 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CYP3A4P08684 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CYP3A4P08684 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
CYP3A4P08684 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CYP3A4P08684 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CYP3A4P08684 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CYP3A4P08684 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CYP3A4P08684 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CYP3A4P08684 AL512430.1-201ENST00000392575 860 ntBASIC15.97■□□□□ 0.15
CYP3A4P08684 HLA-DMA-203ENST00000395305 777 ntBASIC15.97■□□□□ 0.15
CYP3A4P08684 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CYP3A4P08684 FGFR3P1-201ENST00000449999 601 ntBASIC15.97■□□□□ 0.15
CYP3A4P08684 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC15.97■□□□□ 0.15
CYP3A4P08684 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CYP3A4P08684 CFL1-214ENST00000534769 758 ntTSL 2 BASIC15.97■□□□□ 0.15
CYP3A4P08684 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC15.97■□□□□ 0.15
CYP3A4P08684 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CYP3A4P08684 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC15.97■□□□□ 0.15
CYP3A4P08684 AC084781.1-201ENST00000613737 656 ntBASIC15.97■□□□□ 0.15
CYP3A4P08684 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC15.97■□□□□ 0.15
CYP3A4P08684 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC15.97■□□□□ 0.15
CYP3A4P08684 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CYP3A4P08684 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CYP3A4P08684 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CYP3A4P08684 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CYP3A4P08684 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CYP3A4P08684 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC15.97■□□□□ 0.15
CYP3A4P08684 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC15.97■□□□□ 0.15
CYP3A4P08684 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CYP3A4P08684 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CYP3A4P08684 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CYP3A4P08684 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CYP3A4P08684 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CYP3A4P08684 TUBB4AP1-201ENST00000450755 1325 ntBASIC15.96■□□□□ 0.15
CYP3A4P08684 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CYP3A4P08684 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CYP3A4P08684 AC074138.1-201ENST00000611182 1303 ntBASIC15.96■□□□□ 0.15
CYP3A4P08684 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC15.96■□□□□ 0.15
CYP3A4P08684 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CYP3A4P08684 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
CYP3A4P08684 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC15.96■□□□□ 0.15
CYP3A4P08684 LINC01230-201ENST00000625222 3017 ntBASIC15.96■□□□□ 0.15
CYP3A4P08684 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.96■□□□□ 0.15
CYP3A4P08684 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CYP3A4P08684 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC15.96■□□□□ 0.15
CYP3A4P08684 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CYP3A4P08684 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC15.96■□□□□ 0.15
CYP3A4P08684 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CYP3A4P08684 MPV17-204ENST00000399052 749 ntTSL 4 BASIC15.96■□□□□ 0.15
CYP3A4P08684 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC15.96■□□□□ 0.15
CYP3A4P08684 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms