Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 ACTG1P2-201ENST00000415776 1125 ntBASIC17.29■□□□□ 0.36
APPP05067 KRTAP19-9P-201ENST00000421795 191 ntBASIC17.29■□□□□ 0.36
APPP05067 ACTG1P11-201ENST00000425411 1125 ntBASIC17.29■□□□□ 0.36
APPP05067 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC17.29■□□□□ 0.36
APPP05067 AC090857.1-201ENST00000527400 390 ntBASIC17.29■□□□□ 0.36
APPP05067 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
APPP05067 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.29■□□□□ 0.36
APPP05067 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC17.29■□□□□ 0.36
APPP05067 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
APPP05067 AC007191.1-201ENST00000623179 2995 ntBASIC17.29■□□□□ 0.36
APPP05067 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
APPP05067 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
APPP05067 KRT8P21-201ENST00000430398 1491 ntBASIC17.29■□□□□ 0.36
APPP05067 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
APPP05067 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
APPP05067 HSPA8P5-201ENST00000456928 2069 ntBASIC17.28■□□□□ 0.36
APPP05067 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
APPP05067 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
APPP05067 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
APPP05067 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APPP05067 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
APPP05067 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC17.28■□□□□ 0.36
APPP05067 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
APPP05067 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APPP05067 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
APPP05067 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC17.28■□□□□ 0.36
APPP05067 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC17.28■□□□□ 0.36
APPP05067 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
APPP05067 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
APPP05067 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APPP05067 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
APPP05067 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC17.28■□□□□ 0.36
APPP05067 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC17.28■□□□□ 0.36
APPP05067 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
APPP05067 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC17.28■□□□□ 0.36
APPP05067 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APPP05067 KLK3-207ENST00000595952 969 ntTSL 3 BASIC17.28■□□□□ 0.36
APPP05067 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
APPP05067 AL591471.1-201ENST00000621855 229 ntBASIC17.28■□□□□ 0.36
APPP05067 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
APPP05067 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APPP05067 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC17.28■□□□□ 0.36
APPP05067 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC17.28■□□□□ 0.36
APPP05067 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
APPP05067 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APPP05067 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC17.28■□□□□ 0.36
APPP05067 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APPP05067 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
APPP05067 STK26-204ENST00000481105 1835 ntTSL 2 BASIC17.28■□□□□ 0.36
APPP05067 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
APPP05067 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APPP05067 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
APPP05067 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APPP05067 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APPP05067 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
APPP05067 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
APPP05067 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APPP05067 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC17.28■□□□□ 0.36
APPP05067 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
APPP05067 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
APPP05067 AC138969.2-201ENST00000532739 9932 ntBASIC17.27■□□□□ 0.36
APPP05067 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
APPP05067 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
APPP05067 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC17.27■□□□□ 0.36
APPP05067 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
APPP05067 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
APPP05067 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC17.27■□□□□ 0.36
APPP05067 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC17.27■□□□□ 0.36
APPP05067 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
APPP05067 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
APPP05067 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
APPP05067 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
APPP05067 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
APPP05067 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
APPP05067 LAP3P2-201ENST00000454686 1454 ntBASIC17.27■□□□□ 0.36
APPP05067 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
APPP05067 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
APPP05067 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
APPP05067 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
APPP05067 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
APPP05067 CMC1-204ENST00000423894 549 ntTSL 2 BASIC17.27■□□□□ 0.36
APPP05067 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC17.27■□□□□ 0.36
APPP05067 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC17.27■□□□□ 0.36
APPP05067 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
APPP05067 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC17.27■□□□□ 0.36
APPP05067 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC17.27■□□□□ 0.36
APPP05067 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC17.27■□□□□ 0.36
APPP05067 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
APPP05067 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.27■□□□□ 0.36
APPP05067 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
APPP05067 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC17.27■□□□□ 0.35
APPP05067 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
APPP05067 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC17.27■□□□□ 0.35
APPP05067 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC17.27■□□□□ 0.35
APPP05067 HPD-204ENST00000543163 1709 ntTSL 5 BASIC17.27■□□□□ 0.35
APPP05067 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
APPP05067 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
APPP05067 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
APPP05067 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
APPP05067 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms