Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC1P02654 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
APOC1P02654 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC1P02654 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC1P02654 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
APOC1P02654 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC1P02654 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOC1P02654 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC12.82□□□□□ -0.36
APOC1P02654 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOC1P02654 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOC1P02654 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC1P02654 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC1P02654 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC1P02654 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC1P02654 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
APOC1P02654 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC12.82□□□□□ -0.36
APOC1P02654 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
APOC1P02654 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.82□□□□□ -0.36
APOC1P02654 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
APOC1P02654 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOC1P02654 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
APOC1P02654 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC1P02654 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC1P02654 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC1P02654 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
APOC1P02654 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
APOC1P02654 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOC1P02654 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOC1P02654 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOC1P02654 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12.81□□□□□ -0.36
APOC1P02654 AL118506.1-201ENST00000601296 3082 ntBASIC12.81□□□□□ -0.36
APOC1P02654 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
APOC1P02654 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOC1P02654 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
APOC1P02654 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOC1P02654 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
APOC1P02654 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOC1P02654 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
APOC1P02654 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
APOC1P02654 MPV17-205ENST00000402310 906 ntTSL 5 BASIC12.81□□□□□ -0.36
APOC1P02654 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
APOC1P02654 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC12.81□□□□□ -0.36
APOC1P02654 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC12.81□□□□□ -0.36
APOC1P02654 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC12.81□□□□□ -0.36
APOC1P02654 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOC1P02654 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC12.81□□□□□ -0.36
APOC1P02654 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC12.81□□□□□ -0.36
APOC1P02654 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC12.81□□□□□ -0.36
APOC1P02654 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC12.81□□□□□ -0.36
APOC1P02654 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
APOC1P02654 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.81□□□□□ -0.36
APOC1P02654 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC12.81□□□□□ -0.36
APOC1P02654 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.81□□□□□ -0.36
APOC1P02654 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC12.81□□□□□ -0.36
APOC1P02654 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
APOC1P02654 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
APOC1P02654 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
APOC1P02654 OR10B1P-201ENST00000601666 907 ntBASIC12.81□□□□□ -0.36
APOC1P02654 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOC1P02654 AC025048.6-201ENST00000634326 1161 ntBASIC12.81□□□□□ -0.36
APOC1P02654 AC006453.4-201ENST00000636949 1252 ntBASIC12.81□□□□□ -0.36
APOC1P02654 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOC1P02654 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
APOC1P02654 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOC1P02654 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOC1P02654 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOC1P02654 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOC1P02654 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOC1P02654 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
APOC1P02654 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOC1P02654 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
APOC1P02654 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOC1P02654 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
APOC1P02654 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
APOC1P02654 KRT8P24-201ENST00000560290 1559 ntBASIC12.81□□□□□ -0.36
APOC1P02654 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
APOC1P02654 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOC1P02654 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOC1P02654 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOC1P02654 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOC1P02654 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
APOC1P02654 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOC1P02654 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.81□□□□□ -0.36
APOC1P02654 AC106818.1-201ENST00000623223 3242 ntBASIC12.81□□□□□ -0.36
APOC1P02654 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOC1P02654 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
APOC1P02654 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOC1P02654 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12.8□□□□□ -0.36
APOC1P02654 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC12.8□□□□□ -0.36
APOC1P02654 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
APOC1P02654 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
APOC1P02654 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOC1P02654 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOC1P02654 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
APOC1P02654 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOC1P02654 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOC1P02654 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
APOC1P02654 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOC1P02654 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.8□□□□□ -0.36
APOC1P02654 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms