Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CNOT4O95628 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC12.86□□□□□ -0.35
CNOT4O95628 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CNOT4O95628 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CNOT4O95628 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CNOT4O95628 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CNOT4O95628 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC12.86□□□□□ -0.35
CNOT4O95628 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CNOT4O95628 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC12.86□□□□□ -0.35
CNOT4O95628 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC12.86□□□□□ -0.35
CNOT4O95628 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC12.86□□□□□ -0.35
CNOT4O95628 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CNOT4O95628 TMEM198B-204ENST00000484016 896 ntBASIC12.86□□□□□ -0.35
CNOT4O95628 RN7SL720P-201ENST00000488178 304 ntBASIC12.86□□□□□ -0.35
CNOT4O95628 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC12.86□□□□□ -0.35
CNOT4O95628 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC12.86□□□□□ -0.35
CNOT4O95628 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CNOT4O95628 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC12.86□□□□□ -0.35
CNOT4O95628 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC12.86□□□□□ -0.35
CNOT4O95628 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC12.86□□□□□ -0.35
CNOT4O95628 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CNOT4O95628 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC12.86□□□□□ -0.35
CNOT4O95628 AC097724.1-201ENST00000609581 426 ntBASIC12.86□□□□□ -0.35
CNOT4O95628 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CNOT4O95628 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.86□□□□□ -0.35
CNOT4O95628 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
CNOT4O95628 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CNOT4O95628 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CNOT4O95628 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CNOT4O95628 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CNOT4O95628 TMBIM7P-202ENST00000641474 1516 ntBASIC12.86□□□□□ -0.35
CNOT4O95628 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CNOT4O95628 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.86□□□□□ -0.35
CNOT4O95628 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CNOT4O95628 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CNOT4O95628 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CNOT4O95628 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.86□□□□□ -0.35
CNOT4O95628 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CNOT4O95628 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.86□□□□□ -0.35
CNOT4O95628 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CNOT4O95628 TUBBP5-203ENST00000508529 1334 ntBASIC12.86□□□□□ -0.35
CNOT4O95628 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
CNOT4O95628 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.86□□□□□ -0.35
CNOT4O95628 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CNOT4O95628 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CNOT4O95628 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.86□□□□□ -0.35
CNOT4O95628 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.86□□□□□ -0.35
CNOT4O95628 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CNOT4O95628 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CNOT4O95628 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.85□□□□□ -0.35
CNOT4O95628 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.85□□□□□ -0.35
CNOT4O95628 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CNOT4O95628 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CNOT4O95628 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CNOT4O95628 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CNOT4O95628 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.85□□□□□ -0.35
CNOT4O95628 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CNOT4O95628 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CNOT4O95628 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CNOT4O95628 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CNOT4O95628 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CNOT4O95628 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.85□□□□□ -0.35
CNOT4O95628 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CNOT4O95628 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CNOT4O95628 RN7SKP214-201ENST00000364208 315 ntBASIC12.85□□□□□ -0.35
CNOT4O95628 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.85□□□□□ -0.35
CNOT4O95628 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
CNOT4O95628 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CNOT4O95628 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CNOT4O95628 XBP1P1-201ENST00000436573 652 ntBASIC12.85□□□□□ -0.35
CNOT4O95628 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC12.85□□□□□ -0.35
CNOT4O95628 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC12.85□□□□□ -0.35
CNOT4O95628 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CNOT4O95628 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC12.85□□□□□ -0.35
CNOT4O95628 SCARNA21-201ENST00000517026 139 ntBASIC12.85□□□□□ -0.35
CNOT4O95628 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.85□□□□□ -0.35
CNOT4O95628 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC12.85□□□□□ -0.35
CNOT4O95628 SORD2P-201ENST00000558556 1069 ntBASIC12.85□□□□□ -0.35
CNOT4O95628 AC005586.2-201ENST00000563946 837 ntBASIC12.85□□□□□ -0.35
CNOT4O95628 PAM16-211ENST00000575848 518 ntTSL 3 BASIC12.85□□□□□ -0.35
CNOT4O95628 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CNOT4O95628 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.85□□□□□ -0.35
CNOT4O95628 AL645939.5-201ENST00000606834 243 ntBASIC12.85□□□□□ -0.35
CNOT4O95628 AC026740.1-201ENST00000607068 791 ntBASIC12.85□□□□□ -0.35
CNOT4O95628 AP001505.2-201ENST00000616815 443 ntBASIC12.85□□□□□ -0.35
CNOT4O95628 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC12.85□□□□□ -0.35
CNOT4O95628 AL805961.1-203ENST00000641078 1258 ntBASIC12.85□□□□□ -0.35
CNOT4O95628 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.85□□□□□ -0.35
CNOT4O95628 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CNOT4O95628 FP325330.2-201ENST00000624219 5630 ntBASIC12.85□□□□□ -0.35
CNOT4O95628 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CNOT4O95628 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CNOT4O95628 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.85□□□□□ -0.35
CNOT4O95628 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CNOT4O95628 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CNOT4O95628 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CNOT4O95628 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CNOT4O95628 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CNOT4O95628 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CNOT4O95628 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms