Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
GPC4O75487 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GPC4O75487 MYADML-201ENST00000474610 2147 ntBASIC14.5□□□□□ -0.09
GPC4O75487 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
GPC4O75487 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GPC4O75487 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
GPC4O75487 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GPC4O75487 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
GPC4O75487 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.5□□□□□ -0.09
GPC4O75487 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
GPC4O75487 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GPC4O75487 AC107918.4-201ENST00000641966 3141 ntBASIC14.5□□□□□ -0.09
GPC4O75487 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GPC4O75487 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GPC4O75487 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GPC4O75487 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.5□□□□□ -0.09
GPC4O75487 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
GPC4O75487 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.5□□□□□ -0.09
GPC4O75487 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GPC4O75487 AC010141.1-201ENST00000411585 623 ntBASIC14.5□□□□□ -0.09
GPC4O75487 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
GPC4O75487 ATP5G2P4-201ENST00000442175 420 ntBASIC14.5□□□□□ -0.09
GPC4O75487 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GPC4O75487 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.5□□□□□ -0.09
GPC4O75487 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.5□□□□□ -0.09
GPC4O75487 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
GPC4O75487 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GPC4O75487 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.5□□□□□ -0.09
GPC4O75487 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GPC4O75487 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.5□□□□□ -0.09
GPC4O75487 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
GPC4O75487 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GPC4O75487 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GPC4O75487 KRT8P24-201ENST00000560290 1559 ntBASIC14.5□□□□□ -0.09
GPC4O75487 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
GPC4O75487 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
GPC4O75487 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GPC4O75487 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
GPC4O75487 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.5□□□□□ -0.09
GPC4O75487 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GPC4O75487 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC14.5□□□□□ -0.09
GPC4O75487 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
GPC4O75487 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GPC4O75487 KHSRPP1-201ENST00000427983 1768 ntBASIC14.5□□□□□ -0.09
GPC4O75487 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GPC4O75487 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
GPC4O75487 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
GPC4O75487 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
GPC4O75487 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GPC4O75487 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GPC4O75487 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GPC4O75487 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
GPC4O75487 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
GPC4O75487 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GPC4O75487 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
GPC4O75487 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
GPC4O75487 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GPC4O75487 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
GPC4O75487 AC015688.4-201ENST00000580780 1647 ntBASIC14.49□□□□□ -0.09
GPC4O75487 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
GPC4O75487 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.49□□□□□ -0.09
GPC4O75487 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
GPC4O75487 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GPC4O75487 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
GPC4O75487 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GPC4O75487 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.49□□□□□ -0.09
GPC4O75487 GK-202ENST00000378941 458 ntTSL 3 BASIC14.49□□□□□ -0.09
GPC4O75487 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
GPC4O75487 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
GPC4O75487 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.49□□□□□ -0.09
GPC4O75487 HIST2H2BB-201ENST00000449108 381 ntBASIC14.49□□□□□ -0.09
GPC4O75487 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
GPC4O75487 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.49□□□□□ -0.09
GPC4O75487 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
GPC4O75487 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.49□□□□□ -0.09
GPC4O75487 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.49□□□□□ -0.09
GPC4O75487 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
GPC4O75487 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.49□□□□□ -0.09
GPC4O75487 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.49□□□□□ -0.09
GPC4O75487 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
GPC4O75487 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.49□□□□□ -0.09
GPC4O75487 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
GPC4O75487 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
GPC4O75487 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
GPC4O75487 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
GPC4O75487 SON-203ENST00000381679 7860 ntTSL 5 BASIC14.49□□□□□ -0.09
GPC4O75487 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
GPC4O75487 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
GPC4O75487 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GPC4O75487 AC012617.1-204ENST00000586340 2305 ntBASIC14.49□□□□□ -0.09
GPC4O75487 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
GPC4O75487 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
GPC4O75487 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
GPC4O75487 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
GPC4O75487 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.49□□□□□ -0.09
GPC4O75487 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GPC4O75487 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.49□□□□□ -0.09
GPC4O75487 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GPC4O75487 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GPC4O75487 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms