Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 AC152010.1-201ENST00000415779 2006 ntBASIC16.31■□□□□ 0.2
SYNPO2Q9UMS6 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SYNPO2Q9UMS6 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SYNPO2Q9UMS6 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SYNPO2Q9UMS6 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SYNPO2Q9UMS6 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
SYNPO2Q9UMS6 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC16.31■□□□□ 0.2
SYNPO2Q9UMS6 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SYNPO2Q9UMS6 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SYNPO2Q9UMS6 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC16.31■□□□□ 0.2
SYNPO2Q9UMS6 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 AC061965.1-201ENST00000560524 1465 ntBASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 BCAS2P2-201ENST00000425064 674 ntBASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 EEF1DP2-201ENST00000433698 843 ntBASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 AK2P2-201ENST00000439142 405 ntBASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 OR2A1-AS1-210ENST00000496968 531 ntBASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 BATF-202ENST00000555504 361 ntTSL 2 BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 NAMA-206ENST00000605377 509 ntTSL 5 BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 INTS4P1-203ENST00000641008 3683 ntBASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SYNPO2Q9UMS6 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 DKKL1P1-201ENST00000400550 698 ntBASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 RN7SL375P-201ENST00000492442 298 ntBASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 AC093300.1-201ENST00000510368 1201 ntBASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms