Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 XBP1P1-201ENST00000436573 652 ntBASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 MIR3677-201ENST00000578964 60 ntBASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 AC103810.10-201ENST00000606504 343 ntBASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 F10-203ENST00000409306 1450 ntTSL 3 BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HDAC6Q9UBN7 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HDAC6Q9UBN7 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HDAC6Q9UBN7 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC16.27■□□□□ 0.2
HDAC6Q9UBN7 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HDAC6Q9UBN7 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HDAC6Q9UBN7 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
HDAC6Q9UBN7 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC16.27■□□□□ 0.2
HDAC6Q9UBN7 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
HDAC6Q9UBN7 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HDAC6Q9UBN7 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
HDAC6Q9UBN7 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HDAC6Q9UBN7 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
HDAC6Q9UBN7 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HDAC6Q9UBN7 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HDAC6Q9UBN7 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
HDAC6Q9UBN7 KRT18P36-201ENST00000411618 1276 ntBASIC16.27■□□□□ 0.2
HDAC6Q9UBN7 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC16.27■□□□□ 0.2
HDAC6Q9UBN7 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC16.27■□□□□ 0.2
HDAC6Q9UBN7 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.27■□□□□ 0.2
HDAC6Q9UBN7 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HDAC6Q9UBN7 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC16.27■□□□□ 0.2
HDAC6Q9UBN7 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC16.27■□□□□ 0.2
HDAC6Q9UBN7 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC16.27■□□□□ 0.2
HDAC6Q9UBN7 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HDAC6Q9UBN7 NAT9-220ENST00000582870 896 ntTSL 5 BASIC16.27■□□□□ 0.2
HDAC6Q9UBN7 HPN-206ENST00000597419 1212 ntTSL 5 BASIC16.27■□□□□ 0.2
HDAC6Q9UBN7 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.27■□□□□ 0.2
HDAC6Q9UBN7 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC16.27■□□□□ 0.2
HDAC6Q9UBN7 AC092171.5-201ENST00000608012 942 ntBASIC16.27■□□□□ 0.2
HDAC6Q9UBN7 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
HDAC6Q9UBN7 COX6A1P2-201ENST00000620597 330 ntBASIC16.27■□□□□ 0.2
HDAC6Q9UBN7 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC16.27■□□□□ 0.2
HDAC6Q9UBN7 AC011491.1-203ENST00000637688 543 ntBASIC16.27■□□□□ 0.2
HDAC6Q9UBN7 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
HDAC6Q9UBN7 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HDAC6Q9UBN7 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HDAC6Q9UBN7 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
HDAC6Q9UBN7 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HDAC6Q9UBN7 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC16.27■□□□□ 0.2
HDAC6Q9UBN7 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HDAC6Q9UBN7 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HDAC6Q9UBN7 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HDAC6Q9UBN7 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HDAC6Q9UBN7 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HDAC6Q9UBN7 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC16.27■□□□□ 0.19
HDAC6Q9UBN7 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HDAC6Q9UBN7 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.27■□□□□ 0.19
HDAC6Q9UBN7 CICP17-201ENST00000418553 2377 ntBASIC16.27■□□□□ 0.19
HDAC6Q9UBN7 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
HDAC6Q9UBN7 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
HDAC6Q9UBN7 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC16.26■□□□□ 0.19
HDAC6Q9UBN7 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms