Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 LAP3P2-201ENST00000454686 1454 ntBASIC16.81■□□□□ 0.28
SMARCC2Q8TAQ2 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMARCC2Q8TAQ2 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC16.81■□□□□ 0.28
SMARCC2Q8TAQ2 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC16.81■□□□□ 0.28
SMARCC2Q8TAQ2 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMARCC2Q8TAQ2 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMARCC2Q8TAQ2 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC16.81■□□□□ 0.28
SMARCC2Q8TAQ2 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC16.81■□□□□ 0.28
SMARCC2Q8TAQ2 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMARCC2Q8TAQ2 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMARCC2Q8TAQ2 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC16.81■□□□□ 0.28
SMARCC2Q8TAQ2 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC16.81■□□□□ 0.28
SMARCC2Q8TAQ2 BX284668.4-201ENST00000453917 508 ntBASIC16.81■□□□□ 0.28
SMARCC2Q8TAQ2 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SMARCC2Q8TAQ2 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.81■□□□□ 0.28
SMARCC2Q8TAQ2 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.81■□□□□ 0.28
SMARCC2Q8TAQ2 AC003686.1-201ENST00000550956 1034 ntBASIC16.81■□□□□ 0.28
SMARCC2Q8TAQ2 RBM8B-201ENST00000555532 525 ntBASIC16.81■□□□□ 0.28
SMARCC2Q8TAQ2 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.81■□□□□ 0.28
SMARCC2Q8TAQ2 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMARCC2Q8TAQ2 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMARCC2Q8TAQ2 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMARCC2Q8TAQ2 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMARCC2Q8TAQ2 ABR-205ENST00000544583 5595 ntTSL 2 BASIC16.81■□□□□ 0.28
SMARCC2Q8TAQ2 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMARCC2Q8TAQ2 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMARCC2Q8TAQ2 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC16.81■□□□□ 0.28
SMARCC2Q8TAQ2 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SMARCC2Q8TAQ2 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMARCC2Q8TAQ2 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SMARCC2Q8TAQ2 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC16.81■□□□□ 0.28
SMARCC2Q8TAQ2 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMARCC2Q8TAQ2 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMARCC2Q8TAQ2 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SMARCC2Q8TAQ2 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC16.81■□□□□ 0.28
SMARCC2Q8TAQ2 CYP4F23P-201ENST00000593402 1579 ntBASIC16.81■□□□□ 0.28
SMARCC2Q8TAQ2 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SMARCC2Q8TAQ2 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMARCC2Q8TAQ2 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SMARCC2Q8TAQ2 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMARCC2Q8TAQ2 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC16.8■□□□□ 0.28
SMARCC2Q8TAQ2 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SMARCC2Q8TAQ2 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMARCC2Q8TAQ2 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMARCC2Q8TAQ2 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SMARCC2Q8TAQ2 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMARCC2Q8TAQ2 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMARCC2Q8TAQ2 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMARCC2Q8TAQ2 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC16.8■□□□□ 0.28
SMARCC2Q8TAQ2 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMARCC2Q8TAQ2 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMARCC2Q8TAQ2 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC16.8■□□□□ 0.28
SMARCC2Q8TAQ2 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC16.8■□□□□ 0.28
SMARCC2Q8TAQ2 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SMARCC2Q8TAQ2 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMARCC2Q8TAQ2 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMARCC2Q8TAQ2 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC16.8■□□□□ 0.28
SMARCC2Q8TAQ2 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMARCC2Q8TAQ2 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.8■□□□□ 0.28
SMARCC2Q8TAQ2 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMARCC2Q8TAQ2 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
SMARCC2Q8TAQ2 AC016700.1-201ENST00000429424 312 ntBASIC16.8■□□□□ 0.28
SMARCC2Q8TAQ2 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC16.8■□□□□ 0.28
SMARCC2Q8TAQ2 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC16.8■□□□□ 0.28
SMARCC2Q8TAQ2 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.8■□□□□ 0.28
SMARCC2Q8TAQ2 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC16.8■□□□□ 0.28
SMARCC2Q8TAQ2 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC16.8■□□□□ 0.28
SMARCC2Q8TAQ2 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMARCC2Q8TAQ2 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMARCC2Q8TAQ2 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMARCC2Q8TAQ2 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMARCC2Q8TAQ2 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SMARCC2Q8TAQ2 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SMARCC2Q8TAQ2 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMARCC2Q8TAQ2 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
SMARCC2Q8TAQ2 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMARCC2Q8TAQ2 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC16.8■□□□□ 0.28
SMARCC2Q8TAQ2 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
SMARCC2Q8TAQ2 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMARCC2Q8TAQ2 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SMARCC2Q8TAQ2 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMARCC2Q8TAQ2 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMARCC2Q8TAQ2 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC16.79■□□□□ 0.28
SMARCC2Q8TAQ2 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SMARCC2Q8TAQ2 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMARCC2Q8TAQ2 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SMARCC2Q8TAQ2 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SMARCC2Q8TAQ2 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMARCC2Q8TAQ2 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC16.79■□□□□ 0.28
SMARCC2Q8TAQ2 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SMARCC2Q8TAQ2 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SMARCC2Q8TAQ2 CRCP-204ENST00000398684 492 ntTSL 2 BASIC16.79■□□□□ 0.28
SMARCC2Q8TAQ2 CALR4P-201ENST00000431943 946 ntBASIC16.79■□□□□ 0.28
SMARCC2Q8TAQ2 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC16.79■□□□□ 0.28
SMARCC2Q8TAQ2 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SMARCC2Q8TAQ2 HIST2H2BC-201ENST00000498492 580 ntBASIC16.79■□□□□ 0.28
SMARCC2Q8TAQ2 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC16.79■□□□□ 0.28
SMARCC2Q8TAQ2 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC16.79■□□□□ 0.28
SMARCC2Q8TAQ2 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC16.79■□□□□ 0.28
SMARCC2Q8TAQ2 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms