Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HERC4Q5GLZ8 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
HERC4Q5GLZ8 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HERC4Q5GLZ8 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HERC4Q5GLZ8 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC16.11■□□□□ 0.17
HERC4Q5GLZ8 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC16.11■□□□□ 0.17
HERC4Q5GLZ8 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HERC4Q5GLZ8 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HERC4Q5GLZ8 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC16.11■□□□□ 0.17
HERC4Q5GLZ8 TCAM1P-207ENST00000485295 1537 ntBASIC16.11■□□□□ 0.17
HERC4Q5GLZ8 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HERC4Q5GLZ8 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
HERC4Q5GLZ8 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
HERC4Q5GLZ8 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HERC4Q5GLZ8 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC16.11■□□□□ 0.17
HERC4Q5GLZ8 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC16.11■□□□□ 0.17
HERC4Q5GLZ8 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HERC4Q5GLZ8 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC16.11■□□□□ 0.17
HERC4Q5GLZ8 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.11■□□□□ 0.17
HERC4Q5GLZ8 AC104506.1-201ENST00000609247 429 ntBASIC16.11■□□□□ 0.17
HERC4Q5GLZ8 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HERC4Q5GLZ8 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC16.11■□□□□ 0.17
HERC4Q5GLZ8 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HERC4Q5GLZ8 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
HERC4Q5GLZ8 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HERC4Q5GLZ8 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HERC4Q5GLZ8 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
HERC4Q5GLZ8 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HERC4Q5GLZ8 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC16.11■□□□□ 0.17
HERC4Q5GLZ8 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HERC4Q5GLZ8 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HERC4Q5GLZ8 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
HERC4Q5GLZ8 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
HERC4Q5GLZ8 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HERC4Q5GLZ8 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC16.11■□□□□ 0.17
HERC4Q5GLZ8 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 NKAIN1P1-201ENST00000435754 582 ntBASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 Z97180.1-201ENST00000445173 988 ntBASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 AC021723.1-201ENST00000486306 515 ntBASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 AC005730.2-201ENST00000564549 1184 ntBASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 AC005962.1-201ENST00000584100 773 ntBASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 RN7SL555P-201ENST00000584742 339 ntBASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 KLK11-210ENST00000600362 759 ntTSL 3 BASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HERC4Q5GLZ8 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC16.09■□□□□ 0.17
HERC4Q5GLZ8 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HERC4Q5GLZ8 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HERC4Q5GLZ8 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
HERC4Q5GLZ8 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HERC4Q5GLZ8 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC16.09■□□□□ 0.17
HERC4Q5GLZ8 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HERC4Q5GLZ8 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
HERC4Q5GLZ8 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HERC4Q5GLZ8 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HERC4Q5GLZ8 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HERC4Q5GLZ8 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HERC4Q5GLZ8 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC16.09■□□□□ 0.17
HERC4Q5GLZ8 AC069218.1-201ENST00000435269 762 ntBASIC16.09■□□□□ 0.17
HERC4Q5GLZ8 SDHD-202ENST00000525291 790 ntTSL 3 BASIC16.09■□□□□ 0.17
HERC4Q5GLZ8 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC16.09■□□□□ 0.17
HERC4Q5GLZ8 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms