Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ACTA1P68133 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ACTA1P68133 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.87□□□□□ -0.35
ACTA1P68133 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ACTA1P68133 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
ACTA1P68133 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
ACTA1P68133 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
ACTA1P68133 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ACTA1P68133 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ACTA1P68133 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ACTA1P68133 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
ACTA1P68133 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ACTA1P68133 MKRN5P-201ENST00000445263 1467 ntBASIC12.87□□□□□ -0.35
ACTA1P68133 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ACTA1P68133 TDG-209ENST00000544861 1387 ntTSL 2 BASIC12.87□□□□□ -0.35
ACTA1P68133 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.87□□□□□ -0.35
ACTA1P68133 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
ACTA1P68133 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
ACTA1P68133 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ACTA1P68133 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
ACTA1P68133 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC12.87□□□□□ -0.35
ACTA1P68133 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC12.87□□□□□ -0.35
ACTA1P68133 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.87□□□□□ -0.35
ACTA1P68133 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.87□□□□□ -0.35
ACTA1P68133 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ACTA1P68133 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ACTA1P68133 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
ACTA1P68133 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ACTA1P68133 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ACTA1P68133 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ACTA1P68133 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.87□□□□□ -0.35
ACTA1P68133 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ACTA1P68133 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.87□□□□□ -0.35
ACTA1P68133 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC12.87□□□□□ -0.35
ACTA1P68133 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
ACTA1P68133 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ACTA1P68133 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
ACTA1P68133 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
ACTA1P68133 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ACTA1P68133 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ACTA1P68133 PDIA3P1-201ENST00000471856 1510 ntBASIC12.87□□□□□ -0.35
ACTA1P68133 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ACTA1P68133 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ACTA1P68133 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ACTA1P68133 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.87□□□□□ -0.35
ACTA1P68133 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
ACTA1P68133 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ACTA1P68133 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
ACTA1P68133 PTPRVP-205ENST00000641549 5067 ntBASIC12.87□□□□□ -0.35
ACTA1P68133 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ACTA1P68133 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.86□□□□□ -0.35
ACTA1P68133 AL365181.3-201ENST00000605886 3222 ntBASIC12.86□□□□□ -0.35
ACTA1P68133 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.86□□□□□ -0.35
ACTA1P68133 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
ACTA1P68133 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ACTA1P68133 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ACTA1P68133 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
ACTA1P68133 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ACTA1P68133 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.86□□□□□ -0.35
ACTA1P68133 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
ACTA1P68133 AL928654.5-201ENST00000624831 2501 ntBASIC12.86□□□□□ -0.35
ACTA1P68133 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ACTA1P68133 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ACTA1P68133 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.86□□□□□ -0.35
ACTA1P68133 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
ACTA1P68133 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
ACTA1P68133 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
ACTA1P68133 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ACTA1P68133 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ACTA1P68133 AC136604.1-202ENST00000425471 771 ntBASIC12.86□□□□□ -0.35
ACTA1P68133 BCRP1-201ENST00000444246 691 ntBASIC12.86□□□□□ -0.35
ACTA1P68133 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ACTA1P68133 UGT1A2P-201ENST00000454886 866 ntBASIC12.86□□□□□ -0.35
ACTA1P68133 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.86□□□□□ -0.35
ACTA1P68133 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ACTA1P68133 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ACTA1P68133 NEU3-203ENST00000529024 581 ntTSL 3 BASIC12.86□□□□□ -0.35
ACTA1P68133 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC12.86□□□□□ -0.35
ACTA1P68133 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
ACTA1P68133 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC12.86□□□□□ -0.35
ACTA1P68133 SPCS2P1-201ENST00000561636 679 ntBASIC12.86□□□□□ -0.35
ACTA1P68133 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
ACTA1P68133 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.86□□□□□ -0.35
ACTA1P68133 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC12.86□□□□□ -0.35
ACTA1P68133 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC12.86□□□□□ -0.35
ACTA1P68133 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
ACTA1P68133 AL096865.1-201ENST00000606796 927 ntBASIC12.86□□□□□ -0.35
ACTA1P68133 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ACTA1P68133 AC145423.3-201ENST00000615987 467 ntBASIC12.86□□□□□ -0.35
ACTA1P68133 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
ACTA1P68133 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
ACTA1P68133 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ACTA1P68133 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ACTA1P68133 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ACTA1P68133 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.86□□□□□ -0.35
ACTA1P68133 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ACTA1P68133 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.86□□□□□ -0.35
ACTA1P68133 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
ACTA1P68133 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ACTA1P68133 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms