Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
BRPF1P55201 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
BRPF1P55201 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
BRPF1P55201 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BRPF1P55201 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC18.23■□□□□ 0.51
BRPF1P55201 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
BRPF1P55201 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
BRPF1P55201 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC18.23■□□□□ 0.51
BRPF1P55201 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
BRPF1P55201 AL596276.2-201ENST00000447525 331 ntBASIC18.23■□□□□ 0.51
BRPF1P55201 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC18.23■□□□□ 0.51
BRPF1P55201 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC18.23■□□□□ 0.51
BRPF1P55201 GOLGA2P8-201ENST00000505201 779 ntBASIC18.23■□□□□ 0.51
BRPF1P55201 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC18.23■□□□□ 0.51
BRPF1P55201 LY6E-208ENST00000520531 490 ntTSL 2 BASIC18.23■□□□□ 0.51
BRPF1P55201 AC024681.1-201ENST00000521917 487 ntBASIC18.23■□□□□ 0.51
BRPF1P55201 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC18.23■□□□□ 0.51
BRPF1P55201 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC18.23■□□□□ 0.51
BRPF1P55201 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
BRPF1P55201 MEG3_2.1-201ENST00000611456 105 ntBASIC18.23■□□□□ 0.51
BRPF1P55201 AC011491.1-203ENST00000637688 543 ntBASIC18.23■□□□□ 0.51
BRPF1P55201 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
BRPF1P55201 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
BRPF1P55201 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BRPF1P55201 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC18.23■□□□□ 0.51
BRPF1P55201 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BRPF1P55201 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
BRPF1P55201 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BRPF1P55201 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BRPF1P55201 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
BRPF1P55201 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
BRPF1P55201 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
BRPF1P55201 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
BRPF1P55201 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
BRPF1P55201 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
BRPF1P55201 TUBB4AP1-201ENST00000450755 1325 ntBASIC18.23■□□□□ 0.51
BRPF1P55201 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC18.23■□□□□ 0.51
BRPF1P55201 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC18.23■□□□□ 0.51
BRPF1P55201 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
BRPF1P55201 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
BRPF1P55201 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BRPF1P55201 RCC2P1-201ENST00000452257 1476 ntBASIC18.22■□□□□ 0.51
BRPF1P55201 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BRPF1P55201 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
BRPF1P55201 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
BRPF1P55201 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BRPF1P55201 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BRPF1P55201 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BRPF1P55201 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC18.22■□□□□ 0.51
BRPF1P55201 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC18.22■□□□□ 0.51
BRPF1P55201 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC18.22■□□□□ 0.51
BRPF1P55201 NUP210P1-202ENST00000504322 710 ntBASIC18.22■□□□□ 0.51
BRPF1P55201 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC18.22■□□□□ 0.51
BRPF1P55201 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC18.22■□□□□ 0.51
BRPF1P55201 RN7SL736P-201ENST00000613111 269 ntBASIC18.22■□□□□ 0.51
BRPF1P55201 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
BRPF1P55201 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BRPF1P55201 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC18.22■□□□□ 0.51
BRPF1P55201 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BRPF1P55201 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
BRPF1P55201 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BRPF1P55201 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
BRPF1P55201 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BRPF1P55201 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
BRPF1P55201 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC18.22■□□□□ 0.51
BRPF1P55201 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
BRPF1P55201 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
BRPF1P55201 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
BRPF1P55201 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
BRPF1P55201 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
BRPF1P55201 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
BRPF1P55201 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
BRPF1P55201 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
BRPF1P55201 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
BRPF1P55201 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
BRPF1P55201 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
BRPF1P55201 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
BRPF1P55201 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BRPF1P55201 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BRPF1P55201 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC18.21■□□□□ 0.51
BRPF1P55201 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
BRPF1P55201 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
BRPF1P55201 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BRPF1P55201 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
BRPF1P55201 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
BRPF1P55201 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BRPF1P55201 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
BRPF1P55201 AC239868.1-201ENST00000369385 493 ntBASIC18.21■□□□□ 0.51
BRPF1P55201 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
BRPF1P55201 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
BRPF1P55201 HNRNPA1P41-201ENST00000397777 928 ntBASIC18.21■□□□□ 0.51
BRPF1P55201 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC18.21■□□□□ 0.51
BRPF1P55201 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC18.21■□□□□ 0.51
BRPF1P55201 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC18.21■□□□□ 0.51
BRPF1P55201 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC18.21■□□□□ 0.51
BRPF1P55201 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC18.21■□□□□ 0.51
BRPF1P55201 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC18.21■□□□□ 0.51
BRPF1P55201 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
BRPF1P55201 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BRPF1P55201 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms