Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
PSMD4P55036 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PSMD4P55036 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
PSMD4P55036 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.46□□□□□ -0.25
PSMD4P55036 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
PSMD4P55036 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PSMD4P55036 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PSMD4P55036 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
PSMD4P55036 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
PSMD4P55036 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
PSMD4P55036 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
PSMD4P55036 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
PSMD4P55036 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
PSMD4P55036 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
PSMD4P55036 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
PSMD4P55036 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.46□□□□□ -0.26
PSMD4P55036 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
PSMD4P55036 AC005840.4-201ENST00000541242 2494 ntBASIC13.46□□□□□ -0.26
PSMD4P55036 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
PSMD4P55036 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
PSMD4P55036 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
PSMD4P55036 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
PSMD4P55036 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
PSMD4P55036 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
PSMD4P55036 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.45□□□□□ -0.26
PSMD4P55036 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PSMD4P55036 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.45□□□□□ -0.26
PSMD4P55036 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PSMD4P55036 TUBB8P4-201ENST00000511806 1324 ntBASIC13.45□□□□□ -0.26
PSMD4P55036 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PSMD4P55036 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
PSMD4P55036 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PSMD4P55036 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PSMD4P55036 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
PSMD4P55036 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PSMD4P55036 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
PSMD4P55036 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.45□□□□□ -0.26
PSMD4P55036 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
PSMD4P55036 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
PSMD4P55036 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
PSMD4P55036 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
PSMD4P55036 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PSMD4P55036 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.45□□□□□ -0.26
PSMD4P55036 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.45□□□□□ -0.26
PSMD4P55036 POM121L10P-201ENST00000436994 1285 ntBASIC13.45□□□□□ -0.26
PSMD4P55036 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.45□□□□□ -0.26
PSMD4P55036 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.45□□□□□ -0.26
PSMD4P55036 RPSAP36-202ENST00000494591 1261 ntBASIC13.45□□□□□ -0.26
PSMD4P55036 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.45□□□□□ -0.26
PSMD4P55036 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
PSMD4P55036 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PSMD4P55036 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.45□□□□□ -0.26
PSMD4P55036 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.45□□□□□ -0.26
PSMD4P55036 AL583810.1-201ENST00000553344 1045 ntBASIC13.45□□□□□ -0.26
PSMD4P55036 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.45□□□□□ -0.26
PSMD4P55036 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.45□□□□□ -0.26
PSMD4P55036 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PSMD4P55036 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.45□□□□□ -0.26
PSMD4P55036 AC104506.1-201ENST00000609247 429 ntBASIC13.45□□□□□ -0.26
PSMD4P55036 MIR6752-201ENST00000618442 71 ntBASIC13.45□□□□□ -0.26
PSMD4P55036 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.45□□□□□ -0.26
PSMD4P55036 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
PSMD4P55036 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PSMD4P55036 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
PSMD4P55036 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PSMD4P55036 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
PSMD4P55036 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PSMD4P55036 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
PSMD4P55036 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PSMD4P55036 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
PSMD4P55036 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PSMD4P55036 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
PSMD4P55036 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
PSMD4P55036 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PSMD4P55036 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PSMD4P55036 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PSMD4P55036 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
PSMD4P55036 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
PSMD4P55036 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PSMD4P55036 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PSMD4P55036 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.45□□□□□ -0.26
PSMD4P55036 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PSMD4P55036 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
PSMD4P55036 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
PSMD4P55036 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
PSMD4P55036 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.44□□□□□ -0.26
PSMD4P55036 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
PSMD4P55036 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
PSMD4P55036 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
PSMD4P55036 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
PSMD4P55036 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PSMD4P55036 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.44□□□□□ -0.26
PSMD4P55036 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
PSMD4P55036 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PSMD4P55036 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
PSMD4P55036 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
PSMD4P55036 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PSMD4P55036 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
PSMD4P55036 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PSMD4P55036 MIR663B-201ENST00000408361 115 ntBASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms