Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC12.84□□□□□ -0.35
CSNK1A1P48729 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CSNK1A1P48729 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.84□□□□□ -0.35
CSNK1A1P48729 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CSNK1A1P48729 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.84□□□□□ -0.35
CSNK1A1P48729 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CSNK1A1P48729 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CSNK1A1P48729 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.84□□□□□ -0.35
CSNK1A1P48729 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CSNK1A1P48729 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.84□□□□□ -0.35
CSNK1A1P48729 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CSNK1A1P48729 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC12.84□□□□□ -0.35
CSNK1A1P48729 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CSNK1A1P48729 TUBB1P2-201ENST00000422712 1306 ntBASIC12.84□□□□□ -0.35
CSNK1A1P48729 TUBB1P1-201ENST00000503144 1300 ntBASIC12.84□□□□□ -0.35
CSNK1A1P48729 LAP3P2-201ENST00000454686 1454 ntBASIC12.84□□□□□ -0.35
CSNK1A1P48729 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CSNK1A1P48729 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CSNK1A1P48729 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CSNK1A1P48729 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
CSNK1A1P48729 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CSNK1A1P48729 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CSNK1A1P48729 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CSNK1A1P48729 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.83□□□□□ -0.35
CSNK1A1P48729 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.35
CSNK1A1P48729 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
CSNK1A1P48729 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CSNK1A1P48729 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CSNK1A1P48729 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
CSNK1A1P48729 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CSNK1A1P48729 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CSNK1A1P48729 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CSNK1A1P48729 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CSNK1A1P48729 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CSNK1A1P48729 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
CSNK1A1P48729 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CSNK1A1P48729 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC12.83□□□□□ -0.36
CSNK1A1P48729 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CSNK1A1P48729 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CSNK1A1P48729 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CSNK1A1P48729 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CSNK1A1P48729 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CSNK1A1P48729 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CSNK1A1P48729 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
CSNK1A1P48729 MIR663B-201ENST00000408361 115 ntBASIC12.83□□□□□ -0.36
CSNK1A1P48729 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC12.83□□□□□ -0.36
CSNK1A1P48729 ST13P19-201ENST00000442505 1124 ntBASIC12.83□□□□□ -0.36
CSNK1A1P48729 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CSNK1A1P48729 RNMTL1P1-201ENST00000454103 560 ntBASIC12.83□□□□□ -0.36
CSNK1A1P48729 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC12.83□□□□□ -0.36
CSNK1A1P48729 AL160314.3-201ENST00000556041 767 ntBASIC12.83□□□□□ -0.36
CSNK1A1P48729 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC12.83□□□□□ -0.36
CSNK1A1P48729 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC12.83□□□□□ -0.36
CSNK1A1P48729 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC12.83□□□□□ -0.36
CSNK1A1P48729 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC12.83□□□□□ -0.36
CSNK1A1P48729 AC124068.2-201ENST00000569473 1109 ntBASIC12.83□□□□□ -0.36
CSNK1A1P48729 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CSNK1A1P48729 AC104982.3-201ENST00000581995 514 ntBASIC12.83□□□□□ -0.36
CSNK1A1P48729 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.83□□□□□ -0.36
CSNK1A1P48729 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.83□□□□□ -0.36
CSNK1A1P48729 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC12.83□□□□□ -0.36
CSNK1A1P48729 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CSNK1A1P48729 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
CSNK1A1P48729 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CSNK1A1P48729 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC12.83□□□□□ -0.36
CSNK1A1P48729 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CSNK1A1P48729 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CSNK1A1P48729 MST1P2-201ENST00000457982 2291 ntBASIC12.83□□□□□ -0.36
CSNK1A1P48729 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.83□□□□□ -0.36
CSNK1A1P48729 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CSNK1A1P48729 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CSNK1A1P48729 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CSNK1A1P48729 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CSNK1A1P48729 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CSNK1A1P48729 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.83□□□□□ -0.36
CSNK1A1P48729 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
CSNK1A1P48729 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CSNK1A1P48729 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CSNK1A1P48729 AL022313.4-201ENST00000562756 2046 ntBASIC12.83□□□□□ -0.36
CSNK1A1P48729 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CSNK1A1P48729 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CSNK1A1P48729 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC12.82□□□□□ -0.36
CSNK1A1P48729 C1R-201ENST00000535233 2211 ntTSL 2 BASIC12.82□□□□□ -0.36
CSNK1A1P48729 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC12.82□□□□□ -0.36
CSNK1A1P48729 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC12.82□□□□□ -0.36
CSNK1A1P48729 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CSNK1A1P48729 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CSNK1A1P48729 AL359881.3-201ENST00000602640 1721 ntBASIC12.82□□□□□ -0.36
CSNK1A1P48729 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CSNK1A1P48729 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CSNK1A1P48729 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.82□□□□□ -0.36
CSNK1A1P48729 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.82□□□□□ -0.36
CSNK1A1P48729 MBLAC2-202ENST00000514906 1936 ntBASIC12.82□□□□□ -0.36
CSNK1A1P48729 AL137784.3-201ENST00000623858 2288 ntBASIC12.82□□□□□ -0.36
CSNK1A1P48729 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CSNK1A1P48729 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CSNK1A1P48729 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CSNK1A1P48729 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.82□□□□□ -0.36
CSNK1A1P48729 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.82□□□□□ -0.36
CSNK1A1P48729 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms