Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SCNN1AP37088 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.86□□□□□ -0.03
SCNN1AP37088 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SCNN1AP37088 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SCNN1AP37088 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SCNN1AP37088 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SCNN1AP37088 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SCNN1AP37088 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SCNN1AP37088 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SCNN1AP37088 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC14.85□□□□□ -0.03
SCNN1AP37088 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
SCNN1AP37088 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SCNN1AP37088 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SCNN1AP37088 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SCNN1AP37088 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SCNN1AP37088 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SCNN1AP37088 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SCNN1AP37088 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC14.85□□□□□ -0.03
SCNN1AP37088 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SCNN1AP37088 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SCNN1AP37088 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SCNN1AP37088 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
SCNN1AP37088 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SCNN1AP37088 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SCNN1AP37088 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.85□□□□□ -0.03
SCNN1AP37088 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.85□□□□□ -0.03
SCNN1AP37088 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SCNN1AP37088 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SCNN1AP37088 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC14.85□□□□□ -0.03
SCNN1AP37088 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SCNN1AP37088 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
SCNN1AP37088 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC14.85□□□□□ -0.03
SCNN1AP37088 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.85□□□□□ -0.03
SCNN1AP37088 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SCNN1AP37088 MIR769-201ENST00000390225 118 ntBASIC14.85□□□□□ -0.03
SCNN1AP37088 ACTG1P2-201ENST00000415776 1125 ntBASIC14.85□□□□□ -0.03
SCNN1AP37088 ACTG1P11-201ENST00000425411 1125 ntBASIC14.85□□□□□ -0.03
SCNN1AP37088 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.85□□□□□ -0.03
SCNN1AP37088 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.85□□□□□ -0.03
SCNN1AP37088 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.85□□□□□ -0.03
SCNN1AP37088 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.85□□□□□ -0.03
SCNN1AP37088 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.85□□□□□ -0.03
SCNN1AP37088 PHBP15-201ENST00000574228 665 ntBASIC14.85□□□□□ -0.03
SCNN1AP37088 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.85□□□□□ -0.03
SCNN1AP37088 RN7SL455P-201ENST00000580629 282 ntBASIC14.85□□□□□ -0.03
SCNN1AP37088 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.85□□□□□ -0.03
SCNN1AP37088 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.85□□□□□ -0.03
SCNN1AP37088 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SCNN1AP37088 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SCNN1AP37088 AC068760.1-201ENST00000493579 1953 ntBASIC14.85□□□□□ -0.03
SCNN1AP37088 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.85□□□□□ -0.03
SCNN1AP37088 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.85□□□□□ -0.03
SCNN1AP37088 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SCNN1AP37088 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SCNN1AP37088 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SCNN1AP37088 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.85□□□□□ -0.03
SCNN1AP37088 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
SCNN1AP37088 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.85□□□□□ -0.03
SCNN1AP37088 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SCNN1AP37088 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SCNN1AP37088 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
SCNN1AP37088 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.84□□□□□ -0.03
SCNN1AP37088 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SCNN1AP37088 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SCNN1AP37088 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SCNN1AP37088 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SCNN1AP37088 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SCNN1AP37088 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.84□□□□□ -0.03
SCNN1AP37088 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SCNN1AP37088 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.84□□□□□ -0.03
SCNN1AP37088 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SCNN1AP37088 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SCNN1AP37088 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SCNN1AP37088 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
SCNN1AP37088 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SCNN1AP37088 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SCNN1AP37088 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
SCNN1AP37088 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SCNN1AP37088 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SCNN1AP37088 AL928654.5-201ENST00000624831 2501 ntBASIC14.84□□□□□ -0.03
SCNN1AP37088 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SCNN1AP37088 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC14.84□□□□□ -0.03
SCNN1AP37088 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SCNN1AP37088 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC14.84□□□□□ -0.03
SCNN1AP37088 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SCNN1AP37088 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SCNN1AP37088 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SCNN1AP37088 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC14.84□□□□□ -0.03
SCNN1AP37088 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
SCNN1AP37088 ELK2AP-201ENST00000392510 1007 ntBASIC14.84□□□□□ -0.03
SCNN1AP37088 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SCNN1AP37088 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SCNN1AP37088 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC14.84□□□□□ -0.03
SCNN1AP37088 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SCNN1AP37088 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SCNN1AP37088 RN7SL258P-201ENST00000478664 300 ntBASIC14.84□□□□□ -0.03
SCNN1AP37088 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.84□□□□□ -0.03
SCNN1AP37088 CD164-210ENST00000512821 964 ntTSL 2 BASIC14.84□□□□□ -0.03
SCNN1AP37088 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC14.84□□□□□ -0.03
SCNN1AP37088 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 179.2 ms