Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 MIR632-201ENST00000385193 94 ntBASIC19.31■□□□□ 0.68
ATF3P18847 RN7SKP212-201ENST00000410851 328 ntBASIC19.31■□□□□ 0.68
ATF3P18847 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC19.31■□□□□ 0.68
ATF3P18847 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC19.31■□□□□ 0.68
ATF3P18847 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC19.31■□□□□ 0.68
ATF3P18847 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC19.31■□□□□ 0.68
ATF3P18847 RN7SL684P-201ENST00000465665 294 ntBASIC19.31■□□□□ 0.68
ATF3P18847 GYG1-209ENST00000483267 801 ntTSL 2 BASIC19.31■□□□□ 0.68
ATF3P18847 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
ATF3P18847 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC19.31■□□□□ 0.68
ATF3P18847 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC19.31■□□□□ 0.68
ATF3P18847 ABCC6P1-203ENST00000565566 1170 ntBASIC19.31■□□□□ 0.68
ATF3P18847 PRR20FP-201ENST00000603320 180 ntBASIC19.31■□□□□ 0.68
ATF3P18847 BX322562.1-201ENST00000617004 561 ntBASIC19.31■□□□□ 0.68
ATF3P18847 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
ATF3P18847 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATF3P18847 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATF3P18847 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATF3P18847 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ATF3P18847 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATF3P18847 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATF3P18847 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC19.31■□□□□ 0.68
ATF3P18847 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATF3P18847 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC19.3■□□□□ 0.68
ATF3P18847 AC026691.1-201ENST00000602502 2017 ntBASIC19.3■□□□□ 0.68
ATF3P18847 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATF3P18847 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATF3P18847 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATF3P18847 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC19.3■□□□□ 0.68
ATF3P18847 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
ATF3P18847 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC19.3■□□□□ 0.68
ATF3P18847 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ATF3P18847 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATF3P18847 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATF3P18847 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
ATF3P18847 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATF3P18847 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATF3P18847 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
ATF3P18847 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
ATF3P18847 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
ATF3P18847 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATF3P18847 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATF3P18847 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATF3P18847 RNA5SP491-201ENST00000362936 118 ntBASIC19.3■□□□□ 0.68
ATF3P18847 ASS1P1-201ENST00000402854 1237 ntBASIC19.3■□□□□ 0.68
ATF3P18847 AC010086.2-201ENST00000428616 226 ntBASIC19.3■□□□□ 0.68
ATF3P18847 SAP18P2-201ENST00000434334 459 ntBASIC19.3■□□□□ 0.68
ATF3P18847 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC19.3■□□□□ 0.68
ATF3P18847 B9D1-206ENST00000461069 923 ntTSL 2 BASIC19.3■□□□□ 0.68
ATF3P18847 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC19.3■□□□□ 0.68
ATF3P18847 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
ATF3P18847 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ATF3P18847 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC19.3■□□□□ 0.68
ATF3P18847 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
ATF3P18847 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATF3P18847 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATF3P18847 HLA-DQB2-231ENST00000435145 2026 ntBASIC19.3■□□□□ 0.68
ATF3P18847 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
ATF3P18847 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
ATF3P18847 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATF3P18847 AC015909.5-201ENST00000624336 2266 ntBASIC19.3■□□□□ 0.68
ATF3P18847 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ATF3P18847 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
ATF3P18847 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATF3P18847 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
ATF3P18847 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.29■□□□□ 0.68
ATF3P18847 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC19.29■□□□□ 0.68
ATF3P18847 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC19.29■□□□□ 0.68
ATF3P18847 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC19.29■□□□□ 0.68
ATF3P18847 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATF3P18847 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
ATF3P18847 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATF3P18847 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC19.29■□□□□ 0.68
ATF3P18847 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
ATF3P18847 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ATF3P18847 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
ATF3P18847 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC19.29■□□□□ 0.68
ATF3P18847 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATF3P18847 KRT18P33-201ENST00000398525 1043 ntBASIC19.29■□□□□ 0.68
ATF3P18847 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC19.29■□□□□ 0.68
ATF3P18847 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ATF3P18847 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC19.29■□□□□ 0.68
ATF3P18847 AC015818.1-201ENST00000451011 244 ntBASIC19.29■□□□□ 0.68
ATF3P18847 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC19.29■□□□□ 0.68
ATF3P18847 AC023051.2-201ENST00000541141 460 ntBASIC19.29■□□□□ 0.68
ATF3P18847 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
ATF3P18847 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC19.29■□□□□ 0.68
ATF3P18847 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC19.29■□□□□ 0.68
ATF3P18847 AC009041.4-201ENST00000620075 638 ntBASIC19.29■□□□□ 0.68
ATF3P18847 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC19.29■□□□□ 0.68
ATF3P18847 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ATF3P18847 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATF3P18847 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATF3P18847 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATF3P18847 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC19.29■□□□□ 0.68
ATF3P18847 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC19.29■□□□□ 0.68
ATF3P18847 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC19.29■□□□□ 0.68
ATF3P18847 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATF3P18847 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATF3P18847 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms