Protein–RNA interactions for Protein: P17544

ATF7, Cyclic AMP-dependent transcription factor ATF-7, humanhuman

Predicted RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF7P17544 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATF7P17544 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATF7P17544 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
ATF7P17544 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATF7P17544 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC15.82■□□□□ 0.12
ATF7P17544 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATF7P17544 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
ATF7P17544 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC15.82■□□□□ 0.12
ATF7P17544 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC15.82■□□□□ 0.12
ATF7P17544 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC15.82■□□□□ 0.12
ATF7P17544 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC15.82■□□□□ 0.12
ATF7P17544 RN7SL181P-201ENST00000462921 277 ntBASIC15.82■□□□□ 0.12
ATF7P17544 NEU3-205ENST00000531619 582 ntTSL 5 BASIC15.82■□□□□ 0.12
ATF7P17544 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC15.82■□□□□ 0.12
ATF7P17544 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC15.82■□□□□ 0.12
ATF7P17544 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC15.82■□□□□ 0.12
ATF7P17544 MIR3188-201ENST00000583494 85 ntBASIC15.82■□□□□ 0.12
ATF7P17544 WDR7-208ENST00000589935 544 ntTSL 4 BASIC15.82■□□□□ 0.12
ATF7P17544 MIR6769A-201ENST00000617340 73 ntBASIC15.82■□□□□ 0.12
ATF7P17544 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
ATF7P17544 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATF7P17544 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATF7P17544 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATF7P17544 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATF7P17544 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATF7P17544 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
ATF7P17544 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC15.82■□□□□ 0.12
ATF7P17544 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATF7P17544 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATF7P17544 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.82■□□□□ 0.12
ATF7P17544 KHSRPP1-201ENST00000427983 1768 ntBASIC15.82■□□□□ 0.12
ATF7P17544 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATF7P17544 AC113367.3-201ENST00000508316 1912 ntBASIC15.82■□□□□ 0.12
ATF7P17544 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.82■□□□□ 0.12
ATF7P17544 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATF7P17544 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
ATF7P17544 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
ATF7P17544 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.82■□□□□ 0.12
ATF7P17544 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATF7P17544 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATF7P17544 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATF7P17544 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATF7P17544 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATF7P17544 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATF7P17544 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATF7P17544 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATF7P17544 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATF7P17544 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ATF7P17544 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATF7P17544 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATF7P17544 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
ATF7P17544 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
ATF7P17544 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.81■□□□□ 0.12
ATF7P17544 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ATF7P17544 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC15.81■□□□□ 0.12
ATF7P17544 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATF7P17544 TSPY25P-201ENST00000429463 745 ntBASIC15.81■□□□□ 0.12
ATF7P17544 RPL8P2-201ENST00000430538 502 ntBASIC15.81■□□□□ 0.12
ATF7P17544 AC026320.2-201ENST00000434379 478 ntBASIC15.81■□□□□ 0.12
ATF7P17544 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.81■□□□□ 0.12
ATF7P17544 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATF7P17544 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.81■□□□□ 0.12
ATF7P17544 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC15.81■□□□□ 0.12
ATF7P17544 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC15.81■□□□□ 0.12
ATF7P17544 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ATF7P17544 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC15.81■□□□□ 0.12
ATF7P17544 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC15.81■□□□□ 0.12
ATF7P17544 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC15.81■□□□□ 0.12
ATF7P17544 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC15.81■□□□□ 0.12
ATF7P17544 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC15.81■□□□□ 0.12
ATF7P17544 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC15.81■□□□□ 0.12
ATF7P17544 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.81■□□□□ 0.12
ATF7P17544 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATF7P17544 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATF7P17544 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ATF7P17544 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ATF7P17544 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
ATF7P17544 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATF7P17544 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATF7P17544 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ATF7P17544 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATF7P17544 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATF7P17544 FAM90A2P-201ENST00000511144 1395 ntBASIC15.8■□□□□ 0.12
ATF7P17544 FAM90A25P-201ENST00000528404 1395 ntBASIC15.8■□□□□ 0.12
ATF7P17544 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATF7P17544 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.8■□□□□ 0.12
ATF7P17544 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
ATF7P17544 AHCYP4-201ENST00000419201 1315 ntBASIC15.8■□□□□ 0.12
ATF7P17544 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
ATF7P17544 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATF7P17544 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC15.8■□□□□ 0.12
ATF7P17544 RNA5SP359-201ENST00000364838 113 ntBASIC15.8■□□□□ 0.12
ATF7P17544 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATF7P17544 AL627231.1-201ENST00000394467 1125 ntBASIC15.8■□□□□ 0.12
ATF7P17544 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC15.8■□□□□ 0.12
ATF7P17544 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC15.8■□□□□ 0.12
ATF7P17544 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
ATF7P17544 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC15.8■□□□□ 0.12
ATF7P17544 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATF7P17544 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms