Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
CCDC130P13994 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC130P13994 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC130P13994 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC130P13994 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
CCDC130P13994 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC130P13994 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC130P13994 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC130P13994 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC130P13994 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC130P13994 AC016397.2-201ENST00000624848 1985 ntBASIC15.22■□□□□ 0.03
CCDC130P13994 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC130P13994 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.22■□□□□ 0.03
CCDC130P13994 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC130P13994 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC130P13994 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CCDC130P13994 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC130P13994 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC130P13994 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC130P13994 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
CCDC130P13994 TUBB8P4-201ENST00000511806 1324 ntBASIC15.21■□□□□ 0.03
CCDC130P13994 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC130P13994 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC130P13994 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC130P13994 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CCDC130P13994 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC130P13994 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC130P13994 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC130P13994 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC130P13994 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC130P13994 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CCDC130P13994 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.21■□□□□ 0.03
CCDC130P13994 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC130P13994 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC15.21■□□□□ 0.03
CCDC130P13994 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC130P13994 RPS9P1-201ENST00000419943 583 ntBASIC15.21■□□□□ 0.03
CCDC130P13994 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC130P13994 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC130P13994 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC15.21■□□□□ 0.03
CCDC130P13994 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC15.21■□□□□ 0.03
CCDC130P13994 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC130P13994 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC15.21■□□□□ 0.03
CCDC130P13994 CHMP4BP1-201ENST00000556017 588 ntBASIC15.21■□□□□ 0.03
CCDC130P13994 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC15.21■□□□□ 0.03
CCDC130P13994 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC15.21■□□□□ 0.03
CCDC130P13994 AC020922.3-201ENST00000595064 547 ntBASIC15.21■□□□□ 0.03
CCDC130P13994 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC130P13994 AL109837.1-201ENST00000603272 613 ntBASIC15.21■□□□□ 0.03
CCDC130P13994 AC097724.1-201ENST00000609581 426 ntBASIC15.21■□□□□ 0.03
CCDC130P13994 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC130P13994 SNX12-206ENST00000622259 661 ntTSL 5 BASIC15.21■□□□□ 0.03
CCDC130P13994 CU633904.3-201ENST00000624042 1029 ntBASIC15.21■□□□□ 0.03
CCDC130P13994 CDK7-214ENST00000626796 358 ntTSL 5 BASIC15.21■□□□□ 0.03
CCDC130P13994 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC15.21■□□□□ 0.03
CCDC130P13994 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC130P13994 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC15.21■□□□□ 0.03
CCDC130P13994 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC130P13994 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CCDC130P13994 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC130P13994 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC130P13994 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC130P13994 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC130P13994 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC130P13994 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC130P13994 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC130P13994 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC15.21■□□□□ 0.02
CCDC130P13994 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CCDC130P13994 BEND3P1-201ENST00000421591 1944 ntBASIC15.21■□□□□ 0.02
CCDC130P13994 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCDC130P13994 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCDC130P13994 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCDC130P13994 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC15.21■□□□□ 0.02
CCDC130P13994 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
CCDC130P13994 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
CCDC130P13994 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.2■□□□□ 0.02
CCDC130P13994 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC130P13994 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC130P13994 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CCDC130P13994 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CCDC130P13994 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC130P13994 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC130P13994 LINC02486-201ENST00000604157 3000 ntBASIC15.2■□□□□ 0.02
CCDC130P13994 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC130P13994 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC130P13994 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC130P13994 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
CCDC130P13994 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC15.2■□□□□ 0.02
CCDC130P13994 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC15.2■□□□□ 0.02
CCDC130P13994 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC130P13994 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC130P13994 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC130P13994 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC130P13994 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CCDC130P13994 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CCDC130P13994 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC130P13994 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CCDC130P13994 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CCDC130P13994 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC130P13994 AL662890.1-201ENST00000396818 632 ntBASIC15.2■□□□□ 0.02
CCDC130P13994 PFN2-206ENST00000461930 606 ntTSL 4 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms