Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VTNP04004 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
VTNP04004 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VTNP04004 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
VTNP04004 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.66■□□□□ 0.1
VTNP04004 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
VTNP04004 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VTNP04004 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VTNP04004 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
VTNP04004 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VTNP04004 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VTNP04004 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
VTNP04004 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VTNP04004 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
VTNP04004 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VTNP04004 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.66■□□□□ 0.1
VTNP04004 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VTNP04004 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
VTNP04004 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
VTNP04004 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
VTNP04004 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VTNP04004 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VTNP04004 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VTNP04004 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
VTNP04004 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.65■□□□□ 0.1
VTNP04004 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VTNP04004 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VTNP04004 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
VTNP04004 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
VTNP04004 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC15.65■□□□□ 0.1
VTNP04004 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VTNP04004 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
VTNP04004 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VTNP04004 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC15.65■□□□□ 0.1
VTNP04004 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC15.65■□□□□ 0.1
VTNP04004 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC15.65■□□□□ 0.1
VTNP04004 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VTNP04004 NUDT4P2-201ENST00000578341 546 ntBASIC15.65■□□□□ 0.1
VTNP04004 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC15.65■□□□□ 0.1
VTNP04004 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VTNP04004 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VTNP04004 AP001065.2-201ENST00000617205 644 ntBASIC15.65■□□□□ 0.1
VTNP04004 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC15.65■□□□□ 0.1
VTNP04004 AL161773.1-201ENST00000624845 863 ntBASIC15.65■□□□□ 0.1
VTNP04004 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VTNP04004 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VTNP04004 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VTNP04004 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VTNP04004 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VTNP04004 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VTNP04004 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VTNP04004 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.65■□□□□ 0.1
VTNP04004 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VTNP04004 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
VTNP04004 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
VTNP04004 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
VTNP04004 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VTNP04004 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VTNP04004 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.65■□□□□ 0.1
VTNP04004 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VTNP04004 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.65■□□□□ 0.1
VTNP04004 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VTNP04004 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VTNP04004 AC007952.5-201ENST00000572818 1486 ntBASIC15.65■□□□□ 0.1
VTNP04004 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VTNP04004 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VTNP04004 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VTNP04004 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
VTNP04004 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
VTNP04004 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VTNP04004 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
VTNP04004 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VTNP04004 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VTNP04004 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
VTNP04004 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
VTNP04004 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VTNP04004 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
VTNP04004 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
VTNP04004 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
VTNP04004 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VTNP04004 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VTNP04004 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
VTNP04004 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VTNP04004 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.64■□□□□ 0.09
VTNP04004 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VTNP04004 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VTNP04004 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VTNP04004 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
VTNP04004 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
VTNP04004 PYY2-201ENST00000315776 282 ntBASIC15.64■□□□□ 0.09
VTNP04004 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VTNP04004 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VTNP04004 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VTNP04004 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC15.64■□□□□ 0.09
VTNP04004 RN7SKP109-201ENST00000410592 316 ntBASIC15.64■□□□□ 0.09
VTNP04004 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC15.64■□□□□ 0.09
VTNP04004 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC15.64■□□□□ 0.09
VTNP04004 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VTNP04004 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.64■□□□□ 0.09
VTNP04004 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms