Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
APOC3P02656 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC11.49□□□□□ -0.57
APOC3P02656 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
APOC3P02656 ISM2-202ENST00000342219 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOC3P02656 HPSE2-201ENST00000370546 1849 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
APOC3P02656 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC11.49□□□□□ -0.57
APOC3P02656 RNF220-202ENST00000355387 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOC3P02656 C9orf3-203ENST00000375315 3136 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOC3P02656 SP7-202ENST00000536324 3151 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
APOC3P02656 RAB11FIP3-205ENST00000450428 3203 ntTSL 2 BASIC11.48□□□□□ -0.57
APOC3P02656 ATP2A3-203ENST00000359983 3290 ntTSL 5 BASIC11.48□□□□□ -0.57
APOC3P02656 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOC3P02656 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
APOC3P02656 MYT1L-204ENST00000428368 4850 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOC3P02656 NCDN-202ENST00000373243 3683 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOC3P02656 HERC6-203ENST00000380265 3781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOC3P02656 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC11.48□□□□□ -0.57
APOC3P02656 RGS6-201ENST00000343854 5342 ntTSL 5 BASIC11.48□□□□□ -0.57
APOC3P02656 PLAU-201ENST00000372764 2321 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOC3P02656 INTS6L-206ENST00000639893 3904 ntTSL 5 BASIC11.48□□□□□ -0.57
APOC3P02656 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
APOC3P02656 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC11.48□□□□□ -0.57
APOC3P02656 PAFAH1B2-204ENST00000527958 4198 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOC3P02656 RBM39-203ENST00000361162 2831 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOC3P02656 PHLPP2-204ENST00000567016 4812 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
APOC3P02656 AC106865.1-201ENST00000602666 3034 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
APOC3P02656 SIGLEC11-203ENST00000447370 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOC3P02656 DNAJB12-203ENST00000444643 3278 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOC3P02656 MCM3AP-201ENST00000291688 6193 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOC3P02656 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOC3P02656 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
APOC3P02656 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOC3P02656 THAP5-204ENST00000438865 868 ntTSL 2 BASIC11.48□□□□□ -0.57
APOC3P02656 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC11.48□□□□□ -0.57
APOC3P02656 SLC25A3P1-201ENST00000443844 931 ntBASIC11.48□□□□□ -0.57
APOC3P02656 FAAHP1-202ENST00000446499 1238 ntBASIC11.48□□□□□ -0.57
APOC3P02656 NME4-207ENST00000450036 985 ntTSL 3 BASIC11.48□□□□□ -0.57
APOC3P02656 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC11.48□□□□□ -0.57
APOC3P02656 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC11.48□□□□□ -0.57
APOC3P02656 CYB561-216ENST00000582297 897 ntTSL 3 BASIC11.48□□□□□ -0.57
APOC3P02656 AC025181.2-201ENST00000606994 802 ntBASIC11.48□□□□□ -0.57
APOC3P02656 AC114341.1-201ENST00000618070 349 ntBASIC11.48□□□□□ -0.57
APOC3P02656 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC11.48□□□□□ -0.57
APOC3P02656 BCAR1-203ENST00000393422 4064 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
APOC3P02656 PNPLA6-220ENST00000600737 4195 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
APOC3P02656 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC11.48□□□□□ -0.57
APOC3P02656 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOC3P02656 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC11.48□□□□□ -0.57
APOC3P02656 KLF8-202ENST00000374928 4821 ntTSL 2 BASIC11.48□□□□□ -0.57
APOC3P02656 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
APOC3P02656 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC11.48□□□□□ -0.57
APOC3P02656 AC007614.4-201ENST00000564048 1827 ntBASIC11.48□□□□□ -0.57
APOC3P02656 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOC3P02656 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC11.48□□□□□ -0.57
APOC3P02656 PXMP4-203ENST00000409299 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOC3P02656 AC020741.1-201ENST00000381217 2079 ntTSL 2 BASIC11.48□□□□□ -0.57
APOC3P02656 AGPAT1-204ENST00000395496 2103 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
APOC3P02656 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC11.48□□□□□ -0.57
APOC3P02656 LINC00908-202ENST00000578613 2242 ntTSL 2 BASIC11.48□□□□□ -0.57
APOC3P02656 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOC3P02656 SHMT2-201ENST00000328923 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOC3P02656 CHMP2B-201ENST00000263780 2557 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOC3P02656 TCF4-276ENST00000635822 7805 ntTSL 5 BASIC11.48□□□□□ -0.57
APOC3P02656 SLC44A4-210ENST00000544672 2634 ntTSL 2 BASIC11.48□□□□□ -0.57
APOC3P02656 AC018645.3-201ENST00000628855 2646 ntBASIC11.48□□□□□ -0.57
APOC3P02656 POFUT2-203ENST00000349485 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOC3P02656 SLC35A4-201ENST00000323146 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOC3P02656 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
APOC3P02656 ZNF266-206ENST00000592292 3100 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
APOC3P02656 SOCS2-AS1-201ENST00000499137 3325 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
APOC3P02656 ATP1A1-201ENST00000295598 3654 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOC3P02656 DIS3-205ENST00000545453 3651 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
APOC3P02656 PPP4R1-202ENST00000400555 3885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
APOC3P02656 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC11.47□□□□□ -0.57
APOC3P02656 HAUS5-201ENST00000203166 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
APOC3P02656 CR2-202ENST00000367058 4063 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
APOC3P02656 ATP4A-201ENST00000262623 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
APOC3P02656 ATP2C2-201ENST00000262429 3376 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
APOC3P02656 CCDC88A-214ENST00000621814 3089 ntTSL 5 BASIC11.47□□□□□ -0.57
APOC3P02656 HERC2P9-203ENST00000528584 2947 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
APOC3P02656 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
APOC3P02656 TACC1-201ENST00000276520 6513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
APOC3P02656 LINC00642-201ENST00000419459 2026 ntTSL 2 BASIC11.47□□□□□ -0.57
APOC3P02656 ATP6V1B1-201ENST00000234396 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
APOC3P02656 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC11.47□□□□□ -0.57
APOC3P02656 SARS-202ENST00000369923 1882 ntTSL 5 BASIC11.47□□□□□ -0.57
APOC3P02656 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
APOC3P02656 SEC14L1-202ENST00000430767 5283 ntAPPRIS P3 TSL 2 BASIC11.47□□□□□ -0.57
APOC3P02656 AC108024.1-201ENST00000626286 1721 ntBASIC11.47□□□□□ -0.57
APOC3P02656 BORA-202ENST00000377815 1673 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
APOC3P02656 ZNF473-205ENST00000595661 4828 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
APOC3P02656 SFMBT2-201ENST00000361972 7922 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
APOC3P02656 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
APOC3P02656 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
APOC3P02656 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC11.47□□□□□ -0.57
APOC3P02656 ZFAT-202ENST00000429442 4421 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
APOC3P02656 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
APOC3P02656 AR-203ENST00000396044 10221 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
APOC3P02656 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC11.47□□□□□ -0.57
APOC3P02656 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms