Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOA1P02647 ABCA2-223ENST00000614293 8146 ntTSL 5 BASIC12.89□□□□□ -0.35
APOA1P02647 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOA1P02647 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOA1P02647 AL035456.1-201ENST00000456064 1369 ntBASIC12.89□□□□□ -0.35
APOA1P02647 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
APOA1P02647 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOA1P02647 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOA1P02647 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.89□□□□□ -0.35
APOA1P02647 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOA1P02647 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOA1P02647 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
APOA1P02647 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOA1P02647 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOA1P02647 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOA1P02647 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOA1P02647 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC12.89□□□□□ -0.35
APOA1P02647 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.89□□□□□ -0.35
APOA1P02647 HERC2P9-206ENST00000529624 5187 ntBASIC12.89□□□□□ -0.35
APOA1P02647 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOA1P02647 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOA1P02647 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOA1P02647 PER1-202ENST00000354903 3115 ntTSL 2 BASIC12.88□□□□□ -0.35
APOA1P02647 ZNF629-201ENST00000262525 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOA1P02647 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
APOA1P02647 AL645937.6-201ENST00000641122 3727 ntBASIC12.88□□□□□ -0.35
APOA1P02647 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC12.88□□□□□ -0.35
APOA1P02647 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.88□□□□□ -0.35
APOA1P02647 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC12.88□□□□□ -0.35
APOA1P02647 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
APOA1P02647 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC12.88□□□□□ -0.35
APOA1P02647 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
APOA1P02647 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
APOA1P02647 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOA1P02647 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC12.88□□□□□ -0.35
APOA1P02647 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
APOA1P02647 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
APOA1P02647 FAM90A11P-201ENST00000518378 2218 ntBASIC12.88□□□□□ -0.35
APOA1P02647 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOA1P02647 NOL4L-203ENST00000359676 5991 ntTSL 2 BASIC12.88□□□□□ -0.35
APOA1P02647 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
APOA1P02647 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
APOA1P02647 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOA1P02647 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
APOA1P02647 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOA1P02647 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOA1P02647 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC12.88□□□□□ -0.35
APOA1P02647 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC12.88□□□□□ -0.35
APOA1P02647 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC12.88□□□□□ -0.35
APOA1P02647 AC069335.1-201ENST00000489972 472 ntBASIC12.88□□□□□ -0.35
APOA1P02647 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.88□□□□□ -0.35
APOA1P02647 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC12.88□□□□□ -0.35
APOA1P02647 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.88□□□□□ -0.35
APOA1P02647 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOA1P02647 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.88□□□□□ -0.35
APOA1P02647 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.88□□□□□ -0.35
APOA1P02647 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOA1P02647 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOA1P02647 AC060814.4-201ENST00000594169 2163 ntBASIC12.88□□□□□ -0.35
APOA1P02647 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
APOA1P02647 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
APOA1P02647 EBF1-201ENST00000313708 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOA1P02647 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
APOA1P02647 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOA1P02647 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOA1P02647 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
APOA1P02647 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
APOA1P02647 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
APOA1P02647 MBNL1-AS1-202ENST00000608395 6585 ntTSL 2 BASIC12.88□□□□□ -0.35
APOA1P02647 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.88□□□□□ -0.35
APOA1P02647 AC104109.2-201ENST00000602919 1418 ntBASIC12.88□□□□□ -0.35
APOA1P02647 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOA1P02647 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOA1P02647 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOA1P02647 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC12.87□□□□□ -0.35
APOA1P02647 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
APOA1P02647 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.87□□□□□ -0.35
APOA1P02647 SPTY2D1-201ENST00000336349 5754 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOA1P02647 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOA1P02647 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.87□□□□□ -0.35
APOA1P02647 AGGF1P10-201ENST00000635005 2191 ntBASIC12.87□□□□□ -0.35
APOA1P02647 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC12.87□□□□□ -0.35
APOA1P02647 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOA1P02647 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
APOA1P02647 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC12.87□□□□□ -0.35
APOA1P02647 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOA1P02647 PLEKHM1P1-205ENST00000582986 5014 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
APOA1P02647 NXPE3-205ENST00000491511 8074 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
APOA1P02647 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOA1P02647 SUPT20HL1-201ENST00000436466 2618 ntBASIC12.87□□□□□ -0.35
APOA1P02647 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
APOA1P02647 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
APOA1P02647 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC12.87□□□□□ -0.35
APOA1P02647 ARF3-201ENST00000256682 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOA1P02647 SEMA6A-202ENST00000343348 6878 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOA1P02647 TMEM136-202ENST00000375095 4143 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
APOA1P02647 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOA1P02647 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOA1P02647 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC12.87□□□□□ -0.35
APOA1P02647 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 197.4 ms