Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CNOT4O95628 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CNOT4O95628 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CNOT4O95628 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CNOT4O95628 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.88□□□□□ -0.35
CNOT4O95628 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.88□□□□□ -0.35
CNOT4O95628 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.88□□□□□ -0.35
CNOT4O95628 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC12.88□□□□□ -0.35
CNOT4O95628 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC12.88□□□□□ -0.35
CNOT4O95628 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CNOT4O95628 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CNOT4O95628 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CNOT4O95628 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CNOT4O95628 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CNOT4O95628 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CNOT4O95628 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CNOT4O95628 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CNOT4O95628 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CNOT4O95628 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
CNOT4O95628 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CNOT4O95628 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.87□□□□□ -0.35
CNOT4O95628 AC117489.1-201ENST00000625169 3217 ntBASIC12.87□□□□□ -0.35
CNOT4O95628 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.87□□□□□ -0.35
CNOT4O95628 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CNOT4O95628 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CNOT4O95628 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.87□□□□□ -0.35
CNOT4O95628 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CNOT4O95628 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.87□□□□□ -0.35
CNOT4O95628 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CNOT4O95628 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CNOT4O95628 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
CNOT4O95628 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CNOT4O95628 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC12.87□□□□□ -0.35
CNOT4O95628 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC12.87□□□□□ -0.35
CNOT4O95628 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC12.87□□□□□ -0.35
CNOT4O95628 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CNOT4O95628 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC12.87□□□□□ -0.35
CNOT4O95628 CYP46A4P-201ENST00000414953 267 ntBASIC12.87□□□□□ -0.35
CNOT4O95628 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CNOT4O95628 AC016700.1-201ENST00000429424 312 ntBASIC12.87□□□□□ -0.35
CNOT4O95628 AC104073.2-201ENST00000453737 312 ntBASIC12.87□□□□□ -0.35
CNOT4O95628 TSACC-208ENST00000481479 741 ntTSL 2 BASIC12.87□□□□□ -0.35
CNOT4O95628 IMP3P2-201ENST00000489760 475 ntBASIC12.87□□□□□ -0.35
CNOT4O95628 AC125604.1-201ENST00000496255 707 ntBASIC12.87□□□□□ -0.35
CNOT4O95628 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC12.87□□□□□ -0.35
CNOT4O95628 AC022217.1-201ENST00000521069 738 ntBASIC12.87□□□□□ -0.35
CNOT4O95628 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.87□□□□□ -0.35
CNOT4O95628 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC12.87□□□□□ -0.35
CNOT4O95628 AC009779.1-201ENST00000551138 283 ntBASIC12.87□□□□□ -0.35
CNOT4O95628 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC12.87□□□□□ -0.35
CNOT4O95628 MIR4722-201ENST00000578292 60 ntBASIC12.87□□□□□ -0.35
CNOT4O95628 MIR4706-201ENST00000582134 82 ntBASIC12.87□□□□□ -0.35
CNOT4O95628 AC005962.1-201ENST00000584100 773 ntBASIC12.87□□□□□ -0.35
CNOT4O95628 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC12.87□□□□□ -0.35
CNOT4O95628 AC091812.3-201ENST00000621362 345 ntBASIC12.87□□□□□ -0.35
CNOT4O95628 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.87□□□□□ -0.35
CNOT4O95628 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CNOT4O95628 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.87□□□□□ -0.35
CNOT4O95628 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.87□□□□□ -0.35
CNOT4O95628 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CNOT4O95628 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CNOT4O95628 MBLAC2-202ENST00000514906 1936 ntBASIC12.87□□□□□ -0.35
CNOT4O95628 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CNOT4O95628 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CNOT4O95628 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CNOT4O95628 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12.87□□□□□ -0.35
CNOT4O95628 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CNOT4O95628 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.87□□□□□ -0.35
CNOT4O95628 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
CNOT4O95628 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CNOT4O95628 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CNOT4O95628 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CNOT4O95628 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC12.87□□□□□ -0.35
CNOT4O95628 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.87□□□□□ -0.35
CNOT4O95628 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CNOT4O95628 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CNOT4O95628 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
CNOT4O95628 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CNOT4O95628 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC12.87□□□□□ -0.35
CNOT4O95628 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CNOT4O95628 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CNOT4O95628 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CNOT4O95628 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CNOT4O95628 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
CNOT4O95628 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC12.87□□□□□ -0.35
CNOT4O95628 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC12.87□□□□□ -0.35
CNOT4O95628 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CNOT4O95628 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CNOT4O95628 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC12.87□□□□□ -0.35
CNOT4O95628 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CNOT4O95628 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC12.86□□□□□ -0.35
CNOT4O95628 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.86□□□□□ -0.35
CNOT4O95628 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CNOT4O95628 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
CNOT4O95628 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CNOT4O95628 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.86□□□□□ -0.35
CNOT4O95628 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CNOT4O95628 REXO1L1P-201ENST00000379010 6598 ntBASIC12.86□□□□□ -0.35
CNOT4O95628 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CNOT4O95628 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms