Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 AP001267.2-201ENST00000532619 2086 ntBASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 AC097359.2-201ENST00000604992 2389 ntBASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 TMEM198B-204ENST00000484016 896 ntBASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 AC092299.1-201ENST00000632679 757 ntBASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 AL009178.2-201ENST00000597278 2719 ntBASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 AC015802.1-201ENST00000588104 1449 ntBASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 TBC1D3J-201ENST00000620719 1426 ntBASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 NCR3-202ENST00000376071 541 ntTSL 5 BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 PARVG-202ENST00000415224 999 ntTSL 2 BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 AC242376.1-201ENST00000559033 726 ntBASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 BX640514.1-201ENST00000583223 1918 ntBASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA3F8WFD2 FRMPD2B-201ENST00000431305 1347 ntBASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms