Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
COLCA2A8K830 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC10.94□□□□□ -0.66
COLCA2A8K830 ALK-205ENST00000618119 4646 ntTSL 5 BASIC10.94□□□□□ -0.66
COLCA2A8K830 ECM1-202ENST00000369047 2070 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
COLCA2A8K830 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC10.94□□□□□ -0.66
COLCA2A8K830 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
COLCA2A8K830 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC10.94□□□□□ -0.66
COLCA2A8K830 FGFR2-212ENST00000369060 3244 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
COLCA2A8K830 CCT8-201ENST00000286788 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
COLCA2A8K830 NEK6-212ENST00000539416 2582 ntTSL 2 BASIC10.94□□□□□ -0.66
COLCA2A8K830 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
COLCA2A8K830 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC10.94□□□□□ -0.66
COLCA2A8K830 FURIN-201ENST00000268171 4244 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
COLCA2A8K830 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
COLCA2A8K830 TUSC5-201ENST00000333813 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
COLCA2A8K830 CCAR2-206ENST00000520861 3560 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
COLCA2A8K830 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
COLCA2A8K830 ALOX5-208ENST00000612635 1945 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
COLCA2A8K830 IL12A-AS1-203ENST00000497452 2425 ntTSL 2 BASIC10.94□□□□□ -0.66
COLCA2A8K830 DAND5-201ENST00000317060 1877 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
COLCA2A8K830 ZNF839-209ENST00000559185 2905 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
COLCA2A8K830 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
COLCA2A8K830 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC10.94□□□□□ -0.66
COLCA2A8K830 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC10.94□□□□□ -0.66
COLCA2A8K830 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
COLCA2A8K830 KCNAB1-215ENST00000618897 4437 ntTSL 5 BASIC10.94□□□□□ -0.66
COLCA2A8K830 CORO7-202ENST00000537233 3392 ntTSL 2 BASIC10.94□□□□□ -0.66
COLCA2A8K830 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
COLCA2A8K830 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
COLCA2A8K830 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC10.94□□□□□ -0.66
COLCA2A8K830 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC10.94□□□□□ -0.66
COLCA2A8K830 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC10.94□□□□□ -0.66
COLCA2A8K830 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
COLCA2A8K830 TMA16-209ENST00000513272 803 ntTSL 2 BASIC10.94□□□□□ -0.66
COLCA2A8K830 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC10.94□□□□□ -0.66
COLCA2A8K830 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC10.94□□□□□ -0.66
COLCA2A8K830 PAM16-208ENST00000573553 722 ntTSL 2 BASIC10.94□□□□□ -0.66
COLCA2A8K830 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC10.94□□□□□ -0.66
COLCA2A8K830 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
COLCA2A8K830 GPR39-203ENST00000622084 900 ntTSL 5 BASIC10.94□□□□□ -0.66
COLCA2A8K830 ZNF572-201ENST00000319286 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
COLCA2A8K830 RAB11FIP3-205ENST00000450428 3203 ntTSL 2 BASIC10.94□□□□□ -0.66
COLCA2A8K830 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
COLCA2A8K830 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
COLCA2A8K830 FUT8-204ENST00000394586 3559 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
COLCA2A8K830 AL445647.1-201ENST00000606221 3599 ntBASIC10.94□□□□□ -0.66
COLCA2A8K830 ZNF44-202ENST00000355684 2119 ntAPPRIS P3 TSL 2 BASIC10.94□□□□□ -0.66
COLCA2A8K830 IGSF9-201ENST00000361509 3996 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
COLCA2A8K830 USP39-207ENST00000450066 2086 ntTSL 2 BASIC10.94□□□□□ -0.66
COLCA2A8K830 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
COLCA2A8K830 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
COLCA2A8K830 CEP63-204ENST00000383229 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
COLCA2A8K830 CDRT4-204ENST00000619038 2498 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
COLCA2A8K830 LINC00452-202ENST00000609661 2896 ntTSL 5 BASIC10.94□□□□□ -0.66
COLCA2A8K830 MRO-203ENST00000428869 1966 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
COLCA2A8K830 AL356130.1-201ENST00000620188 1965 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
COLCA2A8K830 AC020917.4-201ENST00000623994 1999 ntBASIC10.94□□□□□ -0.66
COLCA2A8K830 USP5-201ENST00000229268 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
COLCA2A8K830 SMG7-214ENST00000508461 3985 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
COLCA2A8K830 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
COLCA2A8K830 RAET1K-202ENST00000533735 1883 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
COLCA2A8K830 DCLRE1C-210ENST00000378289 3532 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
COLCA2A8K830 DEK-201ENST00000244776 1441 ntTSL 2 BASIC10.93□□□□□ -0.66
COLCA2A8K830 TRAF5-203ENST00000367004 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
COLCA2A8K830 MATR3-233ENST00000504203 2243 ntTSL 2 BASIC10.93□□□□□ -0.66
COLCA2A8K830 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
COLCA2A8K830 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC10.93□□□□□ -0.66
COLCA2A8K830 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC10.93□□□□□ -0.66
COLCA2A8K830 AC011481.3-201ENST00000623895 5594 ntBASIC10.93□□□□□ -0.66
COLCA2A8K830 SIRPG-202ENST00000303415 1716 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
COLCA2A8K830 SIRPG-204ENST00000381580 1732 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
COLCA2A8K830 CLU-202ENST00000405140 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
COLCA2A8K830 SORBS2-203ENST00000319471 2824 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
COLCA2A8K830 CDCA2-202ENST00000380665 3565 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
COLCA2A8K830 CTAGE7P-201ENST00000435712 2436 ntBASIC10.93□□□□□ -0.66
COLCA2A8K830 ZNF169-204ENST00000481550 1696 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
COLCA2A8K830 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
COLCA2A8K830 PHF21B-202ENST00000396103 3540 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
COLCA2A8K830 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
COLCA2A8K830 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
COLCA2A8K830 DIP2C-205ENST00000634311 4961 ntTSL 5 BASIC10.93□□□□□ -0.66
COLCA2A8K830 BBOF1-201ENST00000394009 3106 ntAPPRIS P2 TSL 2 BASIC10.93□□□□□ -0.66
COLCA2A8K830 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
COLCA2A8K830 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
COLCA2A8K830 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
COLCA2A8K830 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
COLCA2A8K830 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
COLCA2A8K830 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC10.93□□□□□ -0.66
COLCA2A8K830 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
COLCA2A8K830 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
COLCA2A8K830 AL513480.1-201ENST00000451731 511 ntBASIC10.93□□□□□ -0.66
COLCA2A8K830 HOMER2P1-201ENST00000455653 964 ntBASIC10.93□□□□□ -0.66
COLCA2A8K830 RNA5SP410-201ENST00000516285 106 ntBASIC10.93□□□□□ -0.66
COLCA2A8K830 MSRA-206ENST00000521209 814 ntTSL 3 BASIC10.93□□□□□ -0.66
COLCA2A8K830 DHDH-203ENST00000522614 776 ntTSL 5 BASIC10.93□□□□□ -0.66
COLCA2A8K830 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC10.93□□□□□ -0.66
COLCA2A8K830 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC10.93□□□□□ -0.66
COLCA2A8K830 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC10.93□□□□□ -0.66
COLCA2A8K830 AL355075.4-201ENST00000554988 638 ntBASIC10.93□□□□□ -0.66
COLCA2A8K830 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms