Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM43Q96BQ3 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
TRIM43Q96BQ3 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRIM43Q96BQ3 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRIM43Q96BQ3 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
TRIM43Q96BQ3 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TRIM43Q96BQ3 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRIM43Q96BQ3 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRIM43Q96BQ3 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TRIM43Q96BQ3 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
TRIM43Q96BQ3 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
TRIM43Q96BQ3 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM43Q96BQ3 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM43Q96BQ3 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM43Q96BQ3 FAU-201ENST00000279259 461 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM43Q96BQ3 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM43Q96BQ3 ACTBP14-201ENST00000411655 1089 ntBASIC15.33■□□□□ 0.04
TRIM43Q96BQ3 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC15.33■□□□□ 0.04
TRIM43Q96BQ3 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC15.33■□□□□ 0.04
TRIM43Q96BQ3 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM43Q96BQ3 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC15.33■□□□□ 0.04
TRIM43Q96BQ3 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM43Q96BQ3 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC15.33■□□□□ 0.04
TRIM43Q96BQ3 AC016582.2-202ENST00000587765 1094 ntBASIC15.33■□□□□ 0.04
TRIM43Q96BQ3 AL049840.2-201ENST00000602722 535 ntBASIC15.33■□□□□ 0.04
TRIM43Q96BQ3 AC048382.6-201ENST00000621980 1223 ntBASIC15.33■□□□□ 0.04
TRIM43Q96BQ3 BX322534.1-201ENST00000635574 241 ntBASIC15.33■□□□□ 0.04
TRIM43Q96BQ3 AC215524.1-201ENST00000635696 241 ntBASIC15.33■□□□□ 0.04
TRIM43Q96BQ3 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC15.33■□□□□ 0.04
TRIM43Q96BQ3 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM43Q96BQ3 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM43Q96BQ3 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM43Q96BQ3 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
TRIM43Q96BQ3 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM43Q96BQ3 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM43Q96BQ3 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM43Q96BQ3 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM43Q96BQ3 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.33■□□□□ 0.04
TRIM43Q96BQ3 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC15.33■□□□□ 0.04
TRIM43Q96BQ3 FAM226B-201ENST00000602508 1490 ntBASIC15.33■□□□□ 0.04
TRIM43Q96BQ3 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM43Q96BQ3 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM43Q96BQ3 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC15.32■□□□□ 0.04
TRIM43Q96BQ3 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM43Q96BQ3 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TRIM43Q96BQ3 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM43Q96BQ3 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM43Q96BQ3 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM43Q96BQ3 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
TRIM43Q96BQ3 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.32■□□□□ 0.04
TRIM43Q96BQ3 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM43Q96BQ3 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM43Q96BQ3 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM43Q96BQ3 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM43Q96BQ3 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM43Q96BQ3 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TRIM43Q96BQ3 RPL14-203ENST00000416518 812 ntTSL 3 BASIC15.32■□□□□ 0.04
TRIM43Q96BQ3 FAM197Y6-201ENST00000420524 766 ntBASIC15.32■□□□□ 0.04
TRIM43Q96BQ3 AL773545.2-201ENST00000442149 472 ntBASIC15.32■□□□□ 0.04
TRIM43Q96BQ3 KRT19P4-201ENST00000443208 943 ntBASIC15.32■□□□□ 0.04
TRIM43Q96BQ3 CDK4P1-201ENST00000454213 828 ntBASIC15.32■□□□□ 0.04
TRIM43Q96BQ3 TREX1-203ENST00000456089 629 ntTSL 3 BASIC15.32■□□□□ 0.04
TRIM43Q96BQ3 DPY19L2P4-201ENST00000479881 442 ntBASIC15.32■□□□□ 0.04
TRIM43Q96BQ3 GOLGA2P8-201ENST00000505201 779 ntBASIC15.32■□□□□ 0.04
TRIM43Q96BQ3 TBC1D3P6-201ENST00000505954 962 ntBASIC15.32■□□□□ 0.04
TRIM43Q96BQ3 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC15.32■□□□□ 0.04
TRIM43Q96BQ3 AP000920.1-201ENST00000531824 344 ntBASIC15.32■□□□□ 0.04
TRIM43Q96BQ3 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC15.32■□□□□ 0.04
TRIM43Q96BQ3 AL512310.5-201ENST00000551999 515 ntBASIC15.32■□□□□ 0.04
TRIM43Q96BQ3 INO80E-209ENST00000567254 625 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM43Q96BQ3 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC15.32■□□□□ 0.04
TRIM43Q96BQ3 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.32■□□□□ 0.04
TRIM43Q96BQ3 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM43Q96BQ3 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM43Q96BQ3 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM43Q96BQ3 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM43Q96BQ3 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM43Q96BQ3 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM43Q96BQ3 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM43Q96BQ3 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM43Q96BQ3 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM43Q96BQ3 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM43Q96BQ3 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM43Q96BQ3 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM43Q96BQ3 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM43Q96BQ3 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM43Q96BQ3 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM43Q96BQ3 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM43Q96BQ3 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
TRIM43Q96BQ3 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM43Q96BQ3 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM43Q96BQ3 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM43Q96BQ3 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TRIM43Q96BQ3 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM43Q96BQ3 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM43Q96BQ3 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TRIM43Q96BQ3 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
TRIM43Q96BQ3 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM43Q96BQ3 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM43Q96BQ3 HDGF-202ENST00000368206 960 ntTSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms