Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
BBS1Q8NFJ9 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
BBS1Q8NFJ9 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
BBS1Q8NFJ9 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
BBS1Q8NFJ9 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
BBS1Q8NFJ9 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
BBS1Q8NFJ9 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
BBS1Q8NFJ9 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
BBS1Q8NFJ9 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.01□□□□□ -0.33
BBS1Q8NFJ9 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
BBS1Q8NFJ9 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
BBS1Q8NFJ9 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
BBS1Q8NFJ9 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
BBS1Q8NFJ9 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
BBS1Q8NFJ9 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
BBS1Q8NFJ9 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
BBS1Q8NFJ9 AC004899.2-201ENST00000622993 3860 ntBASIC13□□□□□ -0.33
BBS1Q8NFJ9 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
BBS1Q8NFJ9 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
BBS1Q8NFJ9 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
BBS1Q8NFJ9 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC13□□□□□ -0.33
BBS1Q8NFJ9 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
BBS1Q8NFJ9 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BBS1Q8NFJ9 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BBS1Q8NFJ9 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13□□□□□ -0.33
BBS1Q8NFJ9 AC009093.10-201ENST00000641956 1442 ntBASIC13□□□□□ -0.33
BBS1Q8NFJ9 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
BBS1Q8NFJ9 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
BBS1Q8NFJ9 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BBS1Q8NFJ9 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BBS1Q8NFJ9 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13□□□□□ -0.33
BBS1Q8NFJ9 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13□□□□□ -0.33
BBS1Q8NFJ9 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
BBS1Q8NFJ9 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13□□□□□ -0.33
BBS1Q8NFJ9 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BBS1Q8NFJ9 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13□□□□□ -0.33
BBS1Q8NFJ9 AC011495.1-201ENST00000498085 584 ntBASIC13□□□□□ -0.33
BBS1Q8NFJ9 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13□□□□□ -0.33
BBS1Q8NFJ9 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13□□□□□ -0.33
BBS1Q8NFJ9 RNA5SP421-201ENST00000516864 134 ntBASIC13□□□□□ -0.33
BBS1Q8NFJ9 AP003171.2-201ENST00000528208 925 ntBASIC13□□□□□ -0.33
BBS1Q8NFJ9 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13□□□□□ -0.33
BBS1Q8NFJ9 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13□□□□□ -0.33
BBS1Q8NFJ9 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13□□□□□ -0.33
BBS1Q8NFJ9 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13□□□□□ -0.33
BBS1Q8NFJ9 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13□□□□□ -0.33
BBS1Q8NFJ9 MIR4683-201ENST00000579659 81 ntBASIC13□□□□□ -0.33
BBS1Q8NFJ9 ECM1P1-201ENST00000604092 1279 ntBASIC13□□□□□ -0.33
BBS1Q8NFJ9 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13□□□□□ -0.33
BBS1Q8NFJ9 RPSAP52-203ENST00000622976 1023 ntBASIC13□□□□□ -0.33
BBS1Q8NFJ9 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13□□□□□ -0.33
BBS1Q8NFJ9 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC13□□□□□ -0.33
BBS1Q8NFJ9 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC13□□□□□ -0.33
BBS1Q8NFJ9 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
BBS1Q8NFJ9 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13□□□□□ -0.33
BBS1Q8NFJ9 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
BBS1Q8NFJ9 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13□□□□□ -0.33
BBS1Q8NFJ9 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13□□□□□ -0.33
BBS1Q8NFJ9 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13□□□□□ -0.33
BBS1Q8NFJ9 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
BBS1Q8NFJ9 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BBS1Q8NFJ9 GOLGA8EP-201ENST00000530246 1959 ntBASIC13□□□□□ -0.33
BBS1Q8NFJ9 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13□□□□□ -0.33
BBS1Q8NFJ9 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13□□□□□ -0.33
BBS1Q8NFJ9 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 MIR661-201ENST00000384842 89 ntBASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 BAATP1-201ENST00000412284 1225 ntBASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BBS1Q8NFJ9 PNKD-204ENST00000436005 978 ntTSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms