Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 AC215219.1-201ENST00000400706 1817 ntBASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 RNVU1-8-201ENST00000364272 125 ntBASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 AC006987.1-201ENST00000413610 527 ntBASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 AL139008.1-201ENST00000437894 228 ntBASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 PPOX-204ENST00000462866 473 ntTSL 5 BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 RN7SL23P-201ENST00000484055 275 ntBASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 NAA40-205ENST00000539656 577 ntTSL 4 BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 AC104506.1-201ENST00000609247 429 ntBASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS3Q8IXF0 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 GNG10P1-201ENST00000452289 199 ntBASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 HINT1-205ENST00000508488 703 ntTSL 2 BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms