Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM50Q86XT4 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM50Q86XT4 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM50Q86XT4 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM50Q86XT4 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC16.02■□□□□ 0.16
TRIM50Q86XT4 HPGD-203ENST00000422112 805 ntTSL 2 BASIC16.02■□□□□ 0.16
TRIM50Q86XT4 CHCHD2P9-201ENST00000461726 456 ntBASIC16.02■□□□□ 0.16
TRIM50Q86XT4 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC16.02■□□□□ 0.16
TRIM50Q86XT4 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC16.02■□□□□ 0.16
TRIM50Q86XT4 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC16.02■□□□□ 0.16
TRIM50Q86XT4 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM50Q86XT4 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC16.02■□□□□ 0.16
TRIM50Q86XT4 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.15
TRIM50Q86XT4 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC16.02■□□□□ 0.15
TRIM50Q86XT4 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRIM50Q86XT4 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRIM50Q86XT4 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRIM50Q86XT4 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRIM50Q86XT4 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.15
TRIM50Q86XT4 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRIM50Q86XT4 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
TRIM50Q86XT4 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRIM50Q86XT4 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRIM50Q86XT4 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 KCP-203ENST00000610776 5108 ntTSL 5 BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 AC079112.1-201ENST00000454972 939 ntBASIC16.01■□□□□ 0.15
TRIM50Q86XT4 RN7SL8P-201ENST00000461771 266 ntBASIC16.01■□□□□ 0.15
TRIM50Q86XT4 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 AC140658.4-201ENST00000561990 352 ntBASIC16.01■□□□□ 0.15
TRIM50Q86XT4 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 AL031713.1-201ENST00000564813 661 ntBASIC16.01■□□□□ 0.15
TRIM50Q86XT4 MT3-203ENST00000565838 421 ntTSL 3 BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 ELP5-212ENST00000574255 671 ntTSL 2 BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 AC097359.2-201ENST00000604992 2389 ntBASIC16.01■□□□□ 0.15
TRIM50Q86XT4 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 AC232323.1-201ENST00000540724 2099 ntBASIC16.01■□□□□ 0.15
TRIM50Q86XT4 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 AC067750.1-201ENST00000608826 6545 ntBASIC16.01■□□□□ 0.15
TRIM50Q86XT4 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TRIM50Q86XT4 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
TRIM50Q86XT4 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
TRIM50Q86XT4 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
TRIM50Q86XT4 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM50Q86XT4 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM50Q86XT4 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM50Q86XT4 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM50Q86XT4 AC064801.2-201ENST00000625052 1303 ntBASIC16■□□□□ 0.15
TRIM50Q86XT4 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16■□□□□ 0.15
TRIM50Q86XT4 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16■□□□□ 0.15
TRIM50Q86XT4 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM50Q86XT4 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC16■□□□□ 0.15
TRIM50Q86XT4 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRIM50Q86XT4 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM50Q86XT4 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM50Q86XT4 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM50Q86XT4 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM50Q86XT4 MIR645-201ENST00000385283 94 ntBASIC16■□□□□ 0.15
TRIM50Q86XT4 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms