Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
TTC39BQ5VTQ0 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.04■□□□□ -0
TTC39BQ5VTQ0 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TTC39BQ5VTQ0 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC15.04■□□□□ -0
TTC39BQ5VTQ0 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.04■□□□□ -0
TTC39BQ5VTQ0 TMBIM7P-202ENST00000641474 1516 ntBASIC15.04■□□□□ -0
TTC39BQ5VTQ0 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TTC39BQ5VTQ0 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.04■□□□□ -0
TTC39BQ5VTQ0 FAM90A7P-201ENST00000382628 1395 ntBASIC15.04■□□□□ -0
TTC39BQ5VTQ0 FAM90A23P-201ENST00000400136 1395 ntBASIC15.04■□□□□ -0
TTC39BQ5VTQ0 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
TTC39BQ5VTQ0 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TTC39BQ5VTQ0 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.04■□□□□ -0
TTC39BQ5VTQ0 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.04■□□□□ -0
TTC39BQ5VTQ0 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TTC39BQ5VTQ0 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC15.04■□□□□ -0
TTC39BQ5VTQ0 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC15.04■□□□□ -0
TTC39BQ5VTQ0 CALR4P-201ENST00000431943 946 ntBASIC15.04■□□□□ -0
TTC39BQ5VTQ0 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC15.04■□□□□ -0
TTC39BQ5VTQ0 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.04■□□□□ -0
TTC39BQ5VTQ0 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC15.04■□□□□ -0
TTC39BQ5VTQ0 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.04■□□□□ -0
TTC39BQ5VTQ0 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.04■□□□□ -0
TTC39BQ5VTQ0 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TTC39BQ5VTQ0 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TTC39BQ5VTQ0 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC15.04■□□□□ -0
TTC39BQ5VTQ0 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TTC39BQ5VTQ0 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TTC39BQ5VTQ0 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.04■□□□□ -0
TTC39BQ5VTQ0 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TTC39BQ5VTQ0 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
TTC39BQ5VTQ0 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 KRT8P24-201ENST00000560290 1559 ntBASIC15.03■□□□□ -0
TTC39BQ5VTQ0 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 AC016700.1-201ENST00000429424 312 ntBASIC15.03■□□□□ -0
TTC39BQ5VTQ0 AC078875.1-201ENST00000431907 724 ntBASIC15.03■□□□□ -0
TTC39BQ5VTQ0 AC104073.2-201ENST00000453737 312 ntBASIC15.03■□□□□ -0
TTC39BQ5VTQ0 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 SCARNA21-201ENST00000517026 139 ntBASIC15.03■□□□□ -0
TTC39BQ5VTQ0 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 AC022217.1-201ENST00000521069 738 ntBASIC15.03■□□□□ -0
TTC39BQ5VTQ0 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 AC009779.1-201ENST00000551138 283 ntBASIC15.03■□□□□ -0
TTC39BQ5VTQ0 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 SNORD3B-2-202ENST00000571722 791 ntBASIC15.03■□□□□ -0
TTC39BQ5VTQ0 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 NDUFV2P1-201ENST00000596415 907 ntBASIC15.03■□□□□ -0
TTC39BQ5VTQ0 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 AC012617.1-204ENST00000586340 2305 ntBASIC15.03■□□□□ -0
TTC39BQ5VTQ0 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TTC39BQ5VTQ0 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
TTC39BQ5VTQ0 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TTC39BQ5VTQ0 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
TTC39BQ5VTQ0 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
TTC39BQ5VTQ0 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
TTC39BQ5VTQ0 AHCYP4-201ENST00000419201 1315 ntBASIC15.02■□□□□ -0
TTC39BQ5VTQ0 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms