Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PMS1P54277 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PMS1P54277 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC15.82■□□□□ 0.12
PMS1P54277 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PMS1P54277 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PMS1P54277 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PMS1P54277 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
PMS1P54277 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PMS1P54277 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PMS1P54277 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PMS1P54277 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PMS1P54277 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PMS1P54277 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PMS1P54277 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PMS1P54277 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PMS1P54277 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PMS1P54277 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PMS1P54277 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PMS1P54277 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PMS1P54277 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PMS1P54277 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PMS1P54277 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PMS1P54277 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PMS1P54277 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PMS1P54277 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.81■□□□□ 0.12
PMS1P54277 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PMS1P54277 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
PMS1P54277 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PMS1P54277 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PMS1P54277 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PMS1P54277 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.81■□□□□ 0.12
PMS1P54277 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PMS1P54277 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.81■□□□□ 0.12
PMS1P54277 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PMS1P54277 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PMS1P54277 OR2R1P-201ENST00000441404 914 ntBASIC15.81■□□□□ 0.12
PMS1P54277 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC15.81■□□□□ 0.12
PMS1P54277 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PMS1P54277 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PMS1P54277 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PMS1P54277 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PMS1P54277 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
PMS1P54277 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.81■□□□□ 0.12
PMS1P54277 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
PMS1P54277 ARL16-210ENST00000574938 751 ntTSL 2 BASIC15.81■□□□□ 0.12
PMS1P54277 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PMS1P54277 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC15.81■□□□□ 0.12
PMS1P54277 AC090386.2-201ENST00000623010 1039 ntBASIC15.81■□□□□ 0.12
PMS1P54277 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PMS1P54277 OR2I1P-209ENST00000641730 5365 ntBASIC15.81■□□□□ 0.12
PMS1P54277 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PMS1P54277 ST20-AS1-201ENST00000560255 4223 ntBASIC15.81■□□□□ 0.12
PMS1P54277 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC15.81■□□□□ 0.12
PMS1P54277 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PMS1P54277 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PMS1P54277 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PMS1P54277 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC15.8■□□□□ 0.12
PMS1P54277 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PMS1P54277 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PMS1P54277 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC15.8■□□□□ 0.12
PMS1P54277 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PMS1P54277 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PMS1P54277 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PMS1P54277 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PMS1P54277 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PMS1P54277 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PMS1P54277 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PMS1P54277 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PMS1P54277 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC15.8■□□□□ 0.12
PMS1P54277 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PMS1P54277 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PMS1P54277 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PMS1P54277 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PMS1P54277 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PMS1P54277 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PMS1P54277 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC15.8■□□□□ 0.12
PMS1P54277 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PMS1P54277 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PMS1P54277 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PMS1P54277 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PMS1P54277 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.8■□□□□ 0.12
PMS1P54277 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PMS1P54277 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.8■□□□□ 0.12
PMS1P54277 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.8■□□□□ 0.12
PMS1P54277 AC005034.1-201ENST00000426657 489 ntBASIC15.8■□□□□ 0.12
PMS1P54277 VDAC1P1-201ENST00000439229 848 ntBASIC15.8■□□□□ 0.12
PMS1P54277 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PMS1P54277 AC012441.2-201ENST00000444843 739 ntBASIC15.8■□□□□ 0.12
PMS1P54277 HSPB1P2-201ENST00000448722 546 ntBASIC15.8■□□□□ 0.12
PMS1P54277 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.8■□□□□ 0.12
PMS1P54277 PGAM1P5-201ENST00000548011 764 ntBASIC15.8■□□□□ 0.12
PMS1P54277 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.8■□□□□ 0.12
PMS1P54277 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.8■□□□□ 0.12
PMS1P54277 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PMS1P54277 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.8■□□□□ 0.12
PMS1P54277 AC009542.2-202ENST00000619004 1067 ntBASIC15.8■□□□□ 0.12
PMS1P54277 AL035252.4-201ENST00000624174 288 ntBASIC15.8■□□□□ 0.12
PMS1P54277 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.8■□□□□ 0.12
PMS1P54277 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PMS1P54277 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms