Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HOXD12P35452 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HOXD12P35452 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HOXD12P35452 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
HOXD12P35452 RNA5SP359-201ENST00000364838 113 ntBASIC14.45□□□□□ -0.1
HOXD12P35452 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.45□□□□□ -0.1
HOXD12P35452 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.45□□□□□ -0.1
HOXD12P35452 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.45□□□□□ -0.1
HOXD12P35452 BCAS2P2-201ENST00000425064 674 ntBASIC14.45□□□□□ -0.1
HOXD12P35452 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HOXD12P35452 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HOXD12P35452 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.45□□□□□ -0.1
HOXD12P35452 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HOXD12P35452 KRT18P66-201ENST00000452970 1269 ntBASIC14.45□□□□□ -0.1
HOXD12P35452 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HOXD12P35452 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC14.45□□□□□ -0.1
HOXD12P35452 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC14.45□□□□□ -0.1
HOXD12P35452 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC14.45□□□□□ -0.1
HOXD12P35452 MARK2P16-201ENST00000605714 1723 ntBASIC14.45□□□□□ -0.1
HOXD12P35452 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
HOXD12P35452 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.45□□□□□ -0.1
HOXD12P35452 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HOXD12P35452 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.45□□□□□ -0.1
HOXD12P35452 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HOXD12P35452 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.45□□□□□ -0.1
HOXD12P35452 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
HOXD12P35452 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HOXD12P35452 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC14.45□□□□□ -0.1
HOXD12P35452 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
HOXD12P35452 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
HOXD12P35452 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HOXD12P35452 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.45□□□□□ -0.1
HOXD12P35452 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HOXD12P35452 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HOXD12P35452 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HOXD12P35452 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HOXD12P35452 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HOXD12P35452 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HOXD12P35452 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC14.44□□□□□ -0.1
HOXD12P35452 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HOXD12P35452 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
HOXD12P35452 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HOXD12P35452 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
HOXD12P35452 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HOXD12P35452 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.44□□□□□ -0.1
HOXD12P35452 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HOXD12P35452 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HOXD12P35452 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HOXD12P35452 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HOXD12P35452 BAK1P1-201ENST00000317045 636 ntBASIC14.44□□□□□ -0.1
HOXD12P35452 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HOXD12P35452 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HOXD12P35452 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HOXD12P35452 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HOXD12P35452 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HOXD12P35452 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC14.44□□□□□ -0.1
HOXD12P35452 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC14.44□□□□□ -0.1
HOXD12P35452 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HOXD12P35452 POLD4-208ENST00000532830 904 ntTSL 3 BASIC14.44□□□□□ -0.1
HOXD12P35452 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC14.44□□□□□ -0.1
HOXD12P35452 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC14.44□□□□□ -0.1
HOXD12P35452 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC14.44□□□□□ -0.1
HOXD12P35452 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC14.44□□□□□ -0.1
HOXD12P35452 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC14.44□□□□□ -0.1
HOXD12P35452 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
HOXD12P35452 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HOXD12P35452 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.44□□□□□ -0.1
HOXD12P35452 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.44□□□□□ -0.1
HOXD12P35452 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.44□□□□□ -0.1
HOXD12P35452 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.44□□□□□ -0.1
HOXD12P35452 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HOXD12P35452 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
HOXD12P35452 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.44□□□□□ -0.1
HOXD12P35452 FLJ16779-201ENST00000612722 7638 ntBASIC14.44□□□□□ -0.1
HOXD12P35452 CES1P1-201ENST00000421606 1704 ntBASIC14.44□□□□□ -0.1
HOXD12P35452 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HOXD12P35452 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
HOXD12P35452 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
HOXD12P35452 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXD12P35452 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
HOXD12P35452 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXD12P35452 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC14.43□□□□□ -0.1
HOXD12P35452 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC14.43□□□□□ -0.1
HOXD12P35452 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.43□□□□□ -0.1
HOXD12P35452 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXD12P35452 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.43□□□□□ -0.1
HOXD12P35452 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
HOXD12P35452 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXD12P35452 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXD12P35452 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXD12P35452 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HOXD12P35452 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXD12P35452 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXD12P35452 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXD12P35452 AC009093.10-201ENST00000641956 1442 ntBASIC14.43□□□□□ -0.1
HOXD12P35452 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HOXD12P35452 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC14.43□□□□□ -0.1
HOXD12P35452 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
HOXD12P35452 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXD12P35452 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms