Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AC026150.1-201ENST00000562992 701 ntTSL 5 BASIC19.66■□□□□ 0.74
CPS1P31327 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC19.66■□□□□ 0.74
CPS1P31327 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC19.66■□□□□ 0.74
CPS1P31327 POU5F1-207ENST00000606567 1236 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CPS1P31327 SNX20-205ENST00000610485 557 ntTSL 5 BASIC19.66■□□□□ 0.74
CPS1P31327 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC19.66■□□□□ 0.74
CPS1P31327 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPS1P31327 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPS1P31327 OXGR1-204ENST00000543457 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPS1P31327 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CPS1P31327 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPS1P31327 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPS1P31327 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
CPS1P31327 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPS1P31327 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPS1P31327 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CPS1P31327 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPS1P31327 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC19.66■□□□□ 0.74
CPS1P31327 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC19.66■□□□□ 0.74
CPS1P31327 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CPS1P31327 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPS1P31327 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPS1P31327 CCL19-202ENST00000378800 414 ntTSL 2 BASIC19.66■□□□□ 0.74
CPS1P31327 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC19.66■□□□□ 0.74
CPS1P31327 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC19.66■□□□□ 0.74
CPS1P31327 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC19.66■□□□□ 0.74
CPS1P31327 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC19.66■□□□□ 0.74
CPS1P31327 HNRNPA3P12-201ENST00000437410 1063 ntBASIC19.66■□□□□ 0.74
CPS1P31327 AC015818.1-201ENST00000451011 244 ntBASIC19.66■□□□□ 0.74
CPS1P31327 KRT18P15-201ENST00000458108 1291 ntBASIC19.66■□□□□ 0.74
CPS1P31327 AC023051.2-201ENST00000541141 460 ntBASIC19.66■□□□□ 0.74
CPS1P31327 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC19.66■□□□□ 0.74
CPS1P31327 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC19.66■□□□□ 0.74
CPS1P31327 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC19.66■□□□□ 0.74
CPS1P31327 PCP2-202ENST00000598935 457 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
CPS1P31327 GABARAPL1-219ENST00000629504 379 ntTSL 4 BASIC19.66■□□□□ 0.74
CPS1P31327 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPS1P31327 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPS1P31327 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CPS1P31327 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPS1P31327 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
CPS1P31327 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPS1P31327 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.65■□□□□ 0.74
CPS1P31327 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC19.65■□□□□ 0.74
CPS1P31327 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CPS1P31327 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPS1P31327 RBFOX1-214ENST00000552089 1430 ntTSL 5 BASIC19.65■□□□□ 0.74
CPS1P31327 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPS1P31327 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CPS1P31327 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CPS1P31327 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CPS1P31327 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC19.65■□□□□ 0.74
CPS1P31327 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CPS1P31327 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC19.65■□□□□ 0.74
CPS1P31327 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CPS1P31327 POP5-201ENST00000341039 913 ntTSL 2 BASIC19.65■□□□□ 0.74
CPS1P31327 IGHV3-11-201ENST00000390601 473 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CPS1P31327 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC19.65■□□□□ 0.74
CPS1P31327 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC19.65■□□□□ 0.74
CPS1P31327 AC233724.9-201ENST00000511694 407 ntBASIC19.65■□□□□ 0.74
CPS1P31327 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CPS1P31327 AC010202.1-201ENST00000551181 405 ntBASIC19.65■□□□□ 0.74
CPS1P31327 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC19.65■□□□□ 0.74
CPS1P31327 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC19.65■□□□□ 0.74
CPS1P31327 MIR5193-201ENST00000584510 109 ntBASIC19.65■□□□□ 0.74
CPS1P31327 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC19.65■□□□□ 0.74
CPS1P31327 AC123912.6-201ENST00000612657 315 ntBASIC19.65■□□□□ 0.74
CPS1P31327 AC134878.2-201ENST00000620700 1265 ntBASIC19.65■□□□□ 0.74
CPS1P31327 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC19.65■□□□□ 0.74
CPS1P31327 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CPS1P31327 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPS1P31327 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPS1P31327 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
CPS1P31327 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CPS1P31327 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CPS1P31327 MTHFR-210ENST00000641407 2387 ntBASIC19.65■□□□□ 0.74
CPS1P31327 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC19.64■□□□□ 0.74
CPS1P31327 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CPS1P31327 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CPS1P31327 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC19.64■□□□□ 0.73
CPS1P31327 AL139158.3-201ENST00000641212 1562 ntBASIC19.64■□□□□ 0.73
CPS1P31327 AC068760.1-201ENST00000493579 1953 ntBASIC19.64■□□□□ 0.73
CPS1P31327 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CPS1P31327 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC19.64■□□□□ 0.73
CPS1P31327 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CPS1P31327 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CPS1P31327 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC19.64■□□□□ 0.73
CPS1P31327 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
CPS1P31327 AC079325.1-201ENST00000430386 857 ntBASIC19.64■□□□□ 0.73
CPS1P31327 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC19.64■□□□□ 0.73
CPS1P31327 AC099343.1-201ENST00000513481 609 ntBASIC19.64■□□□□ 0.73
CPS1P31327 COQ10BP2-201ENST00000513804 724 ntBASIC19.64■□□□□ 0.73
CPS1P31327 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC19.64■□□□□ 0.73
CPS1P31327 IMMP1L-215ENST00000534812 612 ntTSL 2 BASIC19.64■□□□□ 0.73
CPS1P31327 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC19.64■□□□□ 0.73
CPS1P31327 MIEF1-215ENST00000637854 213 ntBASIC19.64■□□□□ 0.73
CPS1P31327 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CPS1P31327 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CPS1P31327 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
CPS1P31327 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms