Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.58□□□□□ -0.08
VCLP18206 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VCLP18206 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.58□□□□□ -0.08
VCLP18206 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VCLP18206 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VCLP18206 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
VCLP18206 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VCLP18206 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.58□□□□□ -0.08
VCLP18206 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
VCLP18206 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
VCLP18206 AC015909.5-201ENST00000624336 2266 ntBASIC14.58□□□□□ -0.08
VCLP18206 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
VCLP18206 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.08
VCLP18206 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VCLP18206 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
VCLP18206 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VCLP18206 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VCLP18206 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.58□□□□□ -0.08
VCLP18206 SHC1P1-201ENST00000425230 1745 ntBASIC14.58□□□□□ -0.08
VCLP18206 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VCLP18206 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VCLP18206 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
VCLP18206 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
VCLP18206 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VCLP18206 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
VCLP18206 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VCLP18206 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.57□□□□□ -0.08
VCLP18206 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.57□□□□□ -0.08
VCLP18206 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VCLP18206 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.57□□□□□ -0.08
VCLP18206 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
VCLP18206 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.57□□□□□ -0.08
VCLP18206 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
VCLP18206 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VCLP18206 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
VCLP18206 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
VCLP18206 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
VCLP18206 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
VCLP18206 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
VCLP18206 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.57□□□□□ -0.08
VCLP18206 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.57□□□□□ -0.08
VCLP18206 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VCLP18206 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VCLP18206 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
VCLP18206 MIR1908-201ENST00000410394 80 ntBASIC14.57□□□□□ -0.08
VCLP18206 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VCLP18206 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.57□□□□□ -0.08
VCLP18206 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VCLP18206 PUDPP3-201ENST00000445368 636 ntBASIC14.57□□□□□ -0.08
VCLP18206 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.57□□□□□ -0.08
VCLP18206 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.57□□□□□ -0.08
VCLP18206 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
VCLP18206 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.57□□□□□ -0.08
VCLP18206 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.57□□□□□ -0.08
VCLP18206 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.57□□□□□ -0.08
VCLP18206 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VCLP18206 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.57□□□□□ -0.08
VCLP18206 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VCLP18206 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
VCLP18206 AC009093.2-202ENST00000620513 2079 ntBASIC14.57□□□□□ -0.08
VCLP18206 MRPL37P1-201ENST00000592451 1337 ntBASIC14.57□□□□□ -0.08
VCLP18206 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VCLP18206 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
VCLP18206 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
VCLP18206 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
VCLP18206 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
VCLP18206 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VCLP18206 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
VCLP18206 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
VCLP18206 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
VCLP18206 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.57□□□□□ -0.08
VCLP18206 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VCLP18206 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.57□□□□□ -0.08
VCLP18206 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VCLP18206 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.57□□□□□ -0.08
VCLP18206 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.57□□□□□ -0.08
VCLP18206 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VCLP18206 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VCLP18206 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VCLP18206 AL139385.1-201ENST00000611744 3272 ntBASIC14.56□□□□□ -0.08
VCLP18206 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
VCLP18206 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VCLP18206 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VCLP18206 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VCLP18206 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC14.56□□□□□ -0.08
VCLP18206 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
VCLP18206 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
VCLP18206 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VCLP18206 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.56□□□□□ -0.08
VCLP18206 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.56□□□□□ -0.08
VCLP18206 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VCLP18206 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VCLP18206 FAM86MP-201ENST00000340703 885 ntBASIC14.56□□□□□ -0.08
VCLP18206 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VCLP18206 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VCLP18206 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.56□□□□□ -0.08
VCLP18206 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VCLP18206 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VCLP18206 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.56□□□□□ -0.08
VCLP18206 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms