Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 FAM90A7P-201ENST00000382628 1395 ntBASIC14.9□□□□□ -0.02
CD48P09326 FAM90A23P-201ENST00000400136 1395 ntBASIC14.9□□□□□ -0.02
CD48P09326 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.9□□□□□ -0.02
CD48P09326 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD48P09326 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.9□□□□□ -0.02
CD48P09326 AC018629.1-201ENST00000623381 1736 ntBASIC14.9□□□□□ -0.02
CD48P09326 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC14.9□□□□□ -0.02
CD48P09326 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD48P09326 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CD48P09326 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD48P09326 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CD48P09326 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.9□□□□□ -0.02
CD48P09326 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CD48P09326 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.9□□□□□ -0.02
CD48P09326 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CD48P09326 MIR663B-201ENST00000408361 115 ntBASIC14.9□□□□□ -0.02
CD48P09326 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.9□□□□□ -0.02
CD48P09326 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CD48P09326 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.9□□□□□ -0.02
CD48P09326 AC021723.1-201ENST00000486306 515 ntBASIC14.9□□□□□ -0.02
CD48P09326 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.9□□□□□ -0.02
CD48P09326 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.9□□□□□ -0.02
CD48P09326 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CD48P09326 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.9□□□□□ -0.02
CD48P09326 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.9□□□□□ -0.02
CD48P09326 AC008805.1-201ENST00000590892 364 ntBASIC14.9□□□□□ -0.02
CD48P09326 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.9□□□□□ -0.02
CD48P09326 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.9□□□□□ -0.02
CD48P09326 AC090386.2-201ENST00000623010 1039 ntBASIC14.9□□□□□ -0.02
CD48P09326 AC092299.1-201ENST00000632679 757 ntBASIC14.9□□□□□ -0.02
CD48P09326 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD48P09326 GOLGA8EP-201ENST00000530246 1959 ntBASIC14.9□□□□□ -0.02
CD48P09326 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD48P09326 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD48P09326 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD48P09326 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.9□□□□□ -0.02
CD48P09326 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD48P09326 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD48P09326 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD48P09326 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD48P09326 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
CD48P09326 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CD48P09326 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD48P09326 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CD48P09326 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD48P09326 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD48P09326 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CD48P09326 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD48P09326 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CD48P09326 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD48P09326 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD48P09326 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD48P09326 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CD48P09326 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC14.89□□□□□ -0.03
CD48P09326 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD48P09326 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD48P09326 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD48P09326 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD48P09326 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD48P09326 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
CD48P09326 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD48P09326 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD48P09326 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC14.89□□□□□ -0.03
CD48P09326 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD48P09326 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD48P09326 KRT8P29-201ENST00000420409 1371 ntBASIC14.89□□□□□ -0.03
CD48P09326 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC14.89□□□□□ -0.03
CD48P09326 AC073869.1-201ENST00000415574 2762 ntBASIC14.89□□□□□ -0.03
CD48P09326 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.89□□□□□ -0.03
CD48P09326 AC015909.5-201ENST00000624336 2266 ntBASIC14.89□□□□□ -0.03
CD48P09326 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
CD48P09326 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD48P09326 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD48P09326 AC018735.1-201ENST00000437208 1502 ntBASIC14.89□□□□□ -0.03
CD48P09326 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CD48P09326 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.89□□□□□ -0.03
CD48P09326 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD48P09326 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.89□□□□□ -0.03
CD48P09326 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD48P09326 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD48P09326 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.89□□□□□ -0.03
CD48P09326 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.89□□□□□ -0.03
CD48P09326 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.89□□□□□ -0.03
CD48P09326 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.89□□□□□ -0.03
CD48P09326 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.89□□□□□ -0.03
CD48P09326 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.89□□□□□ -0.03
CD48P09326 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.89□□□□□ -0.03
CD48P09326 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.89□□□□□ -0.03
CD48P09326 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.89□□□□□ -0.03
CD48P09326 AC005695.3-201ENST00000614522 232 ntBASIC14.89□□□□□ -0.03
CD48P09326 AC022748.3-201ENST00000621828 275 ntBASIC14.89□□□□□ -0.03
CD48P09326 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.89□□□□□ -0.03
CD48P09326 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.89□□□□□ -0.03
CD48P09326 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD48P09326 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD48P09326 USP39-207ENST00000450066 2086 ntTSL 2 BASIC14.89□□□□□ -0.03
CD48P09326 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.89□□□□□ -0.03
CD48P09326 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CD48P09326 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.89□□□□□ -0.03
CD48P09326 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms