Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.52□□□□□ -0.09
RETP07949 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC14.52□□□□□ -0.09
RETP07949 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RETP07949 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RETP07949 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RETP07949 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
RETP07949 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RETP07949 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.51□□□□□ -0.09
RETP07949 AC012508.2-201ENST00000567613 1472 ntBASIC14.51□□□□□ -0.09
RETP07949 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC14.51□□□□□ -0.09
RETP07949 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RETP07949 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RETP07949 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
RETP07949 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
RETP07949 RNA5SP359-201ENST00000364838 113 ntBASIC14.51□□□□□ -0.09
RETP07949 AQP7P5-201ENST00000428759 1049 ntBASIC14.51□□□□□ -0.09
RETP07949 AQP7P4-201ENST00000447083 1042 ntBASIC14.51□□□□□ -0.09
RETP07949 AQP7P2-201ENST00000453967 1041 ntBASIC14.51□□□□□ -0.09
RETP07949 DPY19L2P5-201ENST00000456300 331 ntBASIC14.51□□□□□ -0.09
RETP07949 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.51□□□□□ -0.09
RETP07949 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC14.51□□□□□ -0.09
RETP07949 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
RETP07949 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC14.51□□□□□ -0.09
RETP07949 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.51□□□□□ -0.09
RETP07949 AC138701.2-201ENST00000553634 226 ntBASIC14.51□□□□□ -0.09
RETP07949 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.51□□□□□ -0.09
RETP07949 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC14.51□□□□□ -0.09
RETP07949 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.51□□□□□ -0.09
RETP07949 AQP7P3-201ENST00000624547 1041 ntBASIC14.51□□□□□ -0.09
RETP07949 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.51□□□□□ -0.09
RETP07949 CMC2-224ENST00000630396 481 ntTSL 5 BASIC14.51□□□□□ -0.09
RETP07949 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RETP07949 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RETP07949 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RETP07949 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RETP07949 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RETP07949 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.51□□□□□ -0.09
RETP07949 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
RETP07949 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RETP07949 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC14.51□□□□□ -0.09
RETP07949 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RETP07949 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RETP07949 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RETP07949 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RETP07949 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RETP07949 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RETP07949 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RETP07949 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RETP07949 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RETP07949 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RETP07949 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.51□□□□□ -0.09
RETP07949 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.51□□□□□ -0.09
RETP07949 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RETP07949 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
RETP07949 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RETP07949 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
RETP07949 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.5□□□□□ -0.09
RETP07949 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RETP07949 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
RETP07949 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RETP07949 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.5□□□□□ -0.09
RETP07949 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RETP07949 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.5□□□□□ -0.09
RETP07949 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RETP07949 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RETP07949 AC018629.1-201ENST00000623381 1736 ntBASIC14.5□□□□□ -0.09
RETP07949 AC027601.5-201ENST00000624065 2482 ntBASIC14.5□□□□□ -0.09
RETP07949 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
RETP07949 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RETP07949 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RETP07949 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
RETP07949 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RETP07949 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RETP07949 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RETP07949 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.5□□□□□ -0.09
RETP07949 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
RETP07949 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RETP07949 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
RETP07949 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC14.5□□□□□ -0.09
RETP07949 TLE1P1-201ENST00000422965 589 ntBASIC14.5□□□□□ -0.09
RETP07949 KRT17P4-201ENST00000429445 819 ntBASIC14.5□□□□□ -0.09
RETP07949 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.5□□□□□ -0.09
RETP07949 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.5□□□□□ -0.09
RETP07949 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.5□□□□□ -0.09
RETP07949 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RETP07949 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RETP07949 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC14.5□□□□□ -0.09
RETP07949 BX088702.1-201ENST00000610784 235 ntBASIC14.5□□□□□ -0.09
RETP07949 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC14.5□□□□□ -0.09
RETP07949 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.5□□□□□ -0.09
RETP07949 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.5□□□□□ -0.09
RETP07949 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
RETP07949 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.5□□□□□ -0.09
RETP07949 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
RETP07949 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.5□□□□□ -0.09
RETP07949 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.5□□□□□ -0.09
RETP07949 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
RETP07949 HLA-DQB1-202ENST00000399079 1501 ntBASIC14.5□□□□□ -0.09
RETP07949 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
RETP07949 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms