Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13□□□□□ -0.33
PARPBPQ9NWS1 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13□□□□□ -0.33
PARPBPQ9NWS1 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
PARPBPQ9NWS1 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PARPBPQ9NWS1 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 AC010327.5-201ENST00000586923 3061 ntBASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 AC006504.5-208ENST00000588784 2401 ntBASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 AC126915.1-201ENST00000522847 1038 ntBASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 RN7SL163P-201ENST00000583100 276 ntBASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PARPBPQ9NWS1 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
PARPBPQ9NWS1 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.98□□□□□ -0.33
PARPBPQ9NWS1 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PARPBPQ9NWS1 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
PARPBPQ9NWS1 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PARPBPQ9NWS1 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
PARPBPQ9NWS1 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PARPBPQ9NWS1 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
PARPBPQ9NWS1 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PARPBPQ9NWS1 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.98□□□□□ -0.33
PARPBPQ9NWS1 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PARPBPQ9NWS1 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PARPBPQ9NWS1 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PARPBPQ9NWS1 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PARPBPQ9NWS1 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
PARPBPQ9NWS1 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.98□□□□□ -0.33
PARPBPQ9NWS1 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
PARPBPQ9NWS1 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
PARPBPQ9NWS1 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
PARPBPQ9NWS1 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PARPBPQ9NWS1 AC005912.2-201ENST00000619492 2400 ntBASIC12.98□□□□□ -0.33
PARPBPQ9NWS1 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.98□□□□□ -0.33
PARPBPQ9NWS1 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.98□□□□□ -0.33
PARPBPQ9NWS1 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
PARPBPQ9NWS1 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PARPBPQ9NWS1 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PARPBPQ9NWS1 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC12.98□□□□□ -0.33
PARPBPQ9NWS1 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC12.98□□□□□ -0.33
PARPBPQ9NWS1 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC12.98□□□□□ -0.33
PARPBPQ9NWS1 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.98□□□□□ -0.33
PARPBPQ9NWS1 AC004898.1-201ENST00000451057 766 ntBASIC12.98□□□□□ -0.33
PARPBPQ9NWS1 AC104306.2-201ENST00000451877 341 ntBASIC12.98□□□□□ -0.33
PARPBPQ9NWS1 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC12.98□□□□□ -0.33
PARPBPQ9NWS1 AC092658.1-201ENST00000505836 891 ntBASIC12.98□□□□□ -0.33
PARPBPQ9NWS1 AC106794.1-201ENST00000506935 792 ntBASIC12.98□□□□□ -0.33
PARPBPQ9NWS1 CD74-212ENST00000524315 584 ntTSL 5 BASIC12.98□□□□□ -0.33
PARPBPQ9NWS1 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC12.98□□□□□ -0.33
PARPBPQ9NWS1 SORD2P-201ENST00000558556 1069 ntBASIC12.98□□□□□ -0.33
PARPBPQ9NWS1 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC12.98□□□□□ -0.33
PARPBPQ9NWS1 AC005586.2-201ENST00000563946 837 ntBASIC12.98□□□□□ -0.33
PARPBPQ9NWS1 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC12.98□□□□□ -0.33
PARPBPQ9NWS1 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC12.98□□□□□ -0.33
PARPBPQ9NWS1 AC005695.3-201ENST00000614522 232 ntBASIC12.98□□□□□ -0.33
PARPBPQ9NWS1 AP000346.4-201ENST00000614827 381 ntBASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms