Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 STK26-204ENST00000481105 1835 ntTSL 2 BASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 CETP-203ENST00000566128 1733 ntTSL 5 BASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 RPS9P1-201ENST00000419943 583 ntBASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 MIR3188-201ENST00000583494 85 ntBASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 AC243960.2-201ENST00000600996 747 ntBASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 PKD1P5-201ENST00000532415 10291 ntBASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 TUBBP5-203ENST00000508529 1334 ntBASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC15.91■□□□□ 0.14
BLOC1S4Q9NUP1 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
BLOC1S4Q9NUP1 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC15.91■□□□□ 0.14
BLOC1S4Q9NUP1 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
BLOC1S4Q9NUP1 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BLOC1S4Q9NUP1 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BLOC1S4Q9NUP1 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BLOC1S4Q9NUP1 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
BLOC1S4Q9NUP1 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
BLOC1S4Q9NUP1 RNA5SP359-201ENST00000364838 113 ntBASIC15.91■□□□□ 0.14
BLOC1S4Q9NUP1 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
BLOC1S4Q9NUP1 MIR1247-201ENST00000408206 136 ntBASIC15.91■□□□□ 0.14
BLOC1S4Q9NUP1 AC011742.3-201ENST00000439053 820 ntBASIC15.91■□□□□ 0.14
BLOC1S4Q9NUP1 AP001258.2-201ENST00000529891 490 ntBASIC15.91■□□□□ 0.14
BLOC1S4Q9NUP1 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC15.91■□□□□ 0.14
BLOC1S4Q9NUP1 MEG3_2.1-201ENST00000611456 105 ntBASIC15.91■□□□□ 0.14
BLOC1S4Q9NUP1 AC138649.2-201ENST00000615886 705 ntBASIC15.91■□□□□ 0.14
BLOC1S4Q9NUP1 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BLOC1S4Q9NUP1 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.91■□□□□ 0.14
BLOC1S4Q9NUP1 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BLOC1S4Q9NUP1 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC15.91■□□□□ 0.14
BLOC1S4Q9NUP1 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
BLOC1S4Q9NUP1 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
BLOC1S4Q9NUP1 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
BLOC1S4Q9NUP1 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.91■□□□□ 0.14
BLOC1S4Q9NUP1 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BLOC1S4Q9NUP1 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC15.91■□□□□ 0.14
BLOC1S4Q9NUP1 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BLOC1S4Q9NUP1 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
BLOC1S4Q9NUP1 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC15.91■□□□□ 0.14
BLOC1S4Q9NUP1 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BLOC1S4Q9NUP1 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
BLOC1S4Q9NUP1 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BLOC1S4Q9NUP1 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BLOC1S4Q9NUP1 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BLOC1S4Q9NUP1 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
BLOC1S4Q9NUP1 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
BLOC1S4Q9NUP1 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.9■□□□□ 0.14
BLOC1S4Q9NUP1 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BLOC1S4Q9NUP1 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
BLOC1S4Q9NUP1 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
BLOC1S4Q9NUP1 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.9■□□□□ 0.14
BLOC1S4Q9NUP1 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
BLOC1S4Q9NUP1 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
BLOC1S4Q9NUP1 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BLOC1S4Q9NUP1 LSS-211ENST00000522411 2523 ntTSL 2 BASIC15.9■□□□□ 0.14
BLOC1S4Q9NUP1 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BLOC1S4Q9NUP1 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
BLOC1S4Q9NUP1 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
BLOC1S4Q9NUP1 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
BLOC1S4Q9NUP1 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
BLOC1S4Q9NUP1 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC15.9■□□□□ 0.14
BLOC1S4Q9NUP1 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC15.9■□□□□ 0.14
BLOC1S4Q9NUP1 EIF4HP1-201ENST00000453115 687 ntBASIC15.9■□□□□ 0.14
BLOC1S4Q9NUP1 BX284668.4-201ENST00000453917 508 ntBASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms