Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDH11YQ9BZA8 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCDH11YQ9BZA8 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC18.33■□□□□ 0.53
PCDH11YQ9BZA8 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCDH11YQ9BZA8 AC022080.1-201ENST00000366255 781 ntBASIC18.33■□□□□ 0.53
PCDH11YQ9BZA8 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC18.33■□□□□ 0.53
PCDH11YQ9BZA8 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC18.33■□□□□ 0.53
PCDH11YQ9BZA8 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC18.33■□□□□ 0.53
PCDH11YQ9BZA8 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCDH11YQ9BZA8 RPL3P5-201ENST00000441645 1232 ntBASIC18.33■□□□□ 0.53
PCDH11YQ9BZA8 RN7SL128P-201ENST00000467883 305 ntBASIC18.33■□□□□ 0.53
PCDH11YQ9BZA8 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC18.33■□□□□ 0.53
PCDH11YQ9BZA8 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCDH11YQ9BZA8 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC18.33■□□□□ 0.53
PCDH11YQ9BZA8 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC18.33■□□□□ 0.53
PCDH11YQ9BZA8 HNRNPA1P5-201ENST00000558213 966 ntBASIC18.33■□□□□ 0.53
PCDH11YQ9BZA8 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC18.33■□□□□ 0.53
PCDH11YQ9BZA8 AC073869.4-201ENST00000620841 800 ntBASIC18.33■□□□□ 0.53
PCDH11YQ9BZA8 AC015909.5-201ENST00000624336 2266 ntBASIC18.33■□□□□ 0.52
PCDH11YQ9BZA8 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDH11YQ9BZA8 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH11YQ9BZA8 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH11YQ9BZA8 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH11YQ9BZA8 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
PCDH11YQ9BZA8 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDH11YQ9BZA8 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH11YQ9BZA8 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH11YQ9BZA8 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDH11YQ9BZA8 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDH11YQ9BZA8 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH11YQ9BZA8 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
PCDH11YQ9BZA8 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH11YQ9BZA8 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDH11YQ9BZA8 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH11YQ9BZA8 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH11YQ9BZA8 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDH11YQ9BZA8 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PCDH11YQ9BZA8 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH11YQ9BZA8 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH11YQ9BZA8 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH11YQ9BZA8 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH11YQ9BZA8 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH11YQ9BZA8 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH11YQ9BZA8 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC18.32■□□□□ 0.52
PCDH11YQ9BZA8 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDH11YQ9BZA8 NME6-208ENST00000435684 599 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDH11YQ9BZA8 AC092903.1-201ENST00000466506 262 ntBASIC18.32■□□□□ 0.52
PCDH11YQ9BZA8 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC18.32■□□□□ 0.52
PCDH11YQ9BZA8 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH11YQ9BZA8 MBP-238ENST00000580402 915 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDH11YQ9BZA8 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH11YQ9BZA8 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PCDH11YQ9BZA8 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDH11YQ9BZA8 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDH11YQ9BZA8 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH11YQ9BZA8 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDH11YQ9BZA8 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH11YQ9BZA8 AC068760.1-201ENST00000493579 1953 ntBASIC18.32■□□□□ 0.52
PCDH11YQ9BZA8 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH11YQ9BZA8 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH11YQ9BZA8 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH11YQ9BZA8 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH11YQ9BZA8 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH11YQ9BZA8 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
PCDH11YQ9BZA8 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH11YQ9BZA8 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PCDH11YQ9BZA8 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH11YQ9BZA8 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH11YQ9BZA8 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDH11YQ9BZA8 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
PCDH11YQ9BZA8 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH11YQ9BZA8 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PCDH11YQ9BZA8 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PCDH11YQ9BZA8 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDH11YQ9BZA8 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH11YQ9BZA8 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PCDH11YQ9BZA8 AC126177.1-201ENST00000547829 2218 ntBASIC18.31■□□□□ 0.52
PCDH11YQ9BZA8 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PCDH11YQ9BZA8 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH11YQ9BZA8 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH11YQ9BZA8 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDH11YQ9BZA8 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH11YQ9BZA8 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH11YQ9BZA8 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH11YQ9BZA8 AF274858.1-201ENST00000406288 372 ntBASIC18.31■□□□□ 0.52
PCDH11YQ9BZA8 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDH11YQ9BZA8 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC18.31■□□□□ 0.52
PCDH11YQ9BZA8 HNRNPA1P2-207ENST00000432375 960 ntBASIC18.31■□□□□ 0.52
PCDH11YQ9BZA8 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH11YQ9BZA8 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC18.31■□□□□ 0.52
PCDH11YQ9BZA8 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDH11YQ9BZA8 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC18.31■□□□□ 0.52
PCDH11YQ9BZA8 KNOP1P1-201ENST00000542108 989 ntBASIC18.31■□□□□ 0.52
PCDH11YQ9BZA8 MT3-202ENST00000561640 514 ntTSL 3 BASIC18.31■□□□□ 0.52
PCDH11YQ9BZA8 AC027139.1-201ENST00000565286 951 ntBASIC18.31■□□□□ 0.52
PCDH11YQ9BZA8 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDH11YQ9BZA8 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDH11YQ9BZA8 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDH11YQ9BZA8 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDH11YQ9BZA8 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms