Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AL355994.2-201ENST00000447882 704 ntBASIC13.71□□□□□ -0.21
COL21A1Q96P44 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
COL21A1Q96P44 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
COL21A1Q96P44 C2orf69P2-201ENST00000562032 1123 ntBASIC13.71□□□□□ -0.21
COL21A1Q96P44 PPY2P-201ENST00000582808 702 ntBASIC13.71□□□□□ -0.21
COL21A1Q96P44 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
COL21A1Q96P44 MIR4259-201ENST00000584466 101 ntBASIC13.71□□□□□ -0.21
COL21A1Q96P44 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
COL21A1Q96P44 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
COL21A1Q96P44 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.71□□□□□ -0.21
COL21A1Q96P44 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
COL21A1Q96P44 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
COL21A1Q96P44 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
COL21A1Q96P44 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.71□□□□□ -0.21
COL21A1Q96P44 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.71□□□□□ -0.21
COL21A1Q96P44 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
COL21A1Q96P44 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.22
COL21A1Q96P44 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
COL21A1Q96P44 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
COL21A1Q96P44 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.71□□□□□ -0.22
COL21A1Q96P44 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
COL21A1Q96P44 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.71□□□□□ -0.22
COL21A1Q96P44 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.71□□□□□ -0.22
COL21A1Q96P44 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
COL21A1Q96P44 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.71□□□□□ -0.22
COL21A1Q96P44 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.7□□□□□ -0.22
COL21A1Q96P44 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
COL21A1Q96P44 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL21A1Q96P44 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL21A1Q96P44 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.7□□□□□ -0.22
COL21A1Q96P44 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL21A1Q96P44 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.7□□□□□ -0.22
COL21A1Q96P44 HSPA8P5-201ENST00000456928 2069 ntBASIC13.7□□□□□ -0.22
COL21A1Q96P44 AC139712.1-201ENST00000378256 1875 ntBASIC13.7□□□□□ -0.22
COL21A1Q96P44 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL21A1Q96P44 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL21A1Q96P44 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL21A1Q96P44 KRT8P4-201ENST00000509735 1454 ntBASIC13.7□□□□□ -0.22
COL21A1Q96P44 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL21A1Q96P44 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL21A1Q96P44 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL21A1Q96P44 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.7□□□□□ -0.22
COL21A1Q96P44 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
COL21A1Q96P44 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.7□□□□□ -0.22
COL21A1Q96P44 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.7□□□□□ -0.22
COL21A1Q96P44 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
COL21A1Q96P44 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
COL21A1Q96P44 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.7□□□□□ -0.22
COL21A1Q96P44 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.7□□□□□ -0.22
COL21A1Q96P44 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.7□□□□□ -0.22
COL21A1Q96P44 AC103988.2-201ENST00000561804 725 ntBASIC13.7□□□□□ -0.22
COL21A1Q96P44 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.7□□□□□ -0.22
COL21A1Q96P44 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.7□□□□□ -0.22
COL21A1Q96P44 AC002472.3-201ENST00000640124 621 ntBASIC13.7□□□□□ -0.22
COL21A1Q96P44 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL21A1Q96P44 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL21A1Q96P44 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL21A1Q96P44 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.7□□□□□ -0.22
COL21A1Q96P44 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL21A1Q96P44 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL21A1Q96P44 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL21A1Q96P44 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL21A1Q96P44 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.7□□□□□ -0.22
COL21A1Q96P44 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.7□□□□□ -0.22
COL21A1Q96P44 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.7□□□□□ -0.22
COL21A1Q96P44 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL21A1Q96P44 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.7□□□□□ -0.22
COL21A1Q96P44 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
COL21A1Q96P44 AL591122.2-201ENST00000624125 1853 ntBASIC13.7□□□□□ -0.22
COL21A1Q96P44 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
COL21A1Q96P44 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL21A1Q96P44 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
COL21A1Q96P44 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
COL21A1Q96P44 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.69□□□□□ -0.22
COL21A1Q96P44 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL21A1Q96P44 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL21A1Q96P44 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL21A1Q96P44 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.69□□□□□ -0.22
COL21A1Q96P44 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.69□□□□□ -0.22
COL21A1Q96P44 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.69□□□□□ -0.22
COL21A1Q96P44 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
COL21A1Q96P44 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
COL21A1Q96P44 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
COL21A1Q96P44 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL21A1Q96P44 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL21A1Q96P44 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.69□□□□□ -0.22
COL21A1Q96P44 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.69□□□□□ -0.22
COL21A1Q96P44 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL21A1Q96P44 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL21A1Q96P44 AC009093.2-202ENST00000620513 2079 ntBASIC13.69□□□□□ -0.22
COL21A1Q96P44 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL21A1Q96P44 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
COL21A1Q96P44 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL21A1Q96P44 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.69□□□□□ -0.22
COL21A1Q96P44 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
COL21A1Q96P44 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
COL21A1Q96P44 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.69□□□□□ -0.22
COL21A1Q96P44 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.69□□□□□ -0.22
COL21A1Q96P44 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.69□□□□□ -0.22
COL21A1Q96P44 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms