Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.13■□□□□ 0.01
SHKBP1Q8TBC3 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SHKBP1Q8TBC3 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHKBP1Q8TBC3 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC15.12■□□□□ 0.01
SHKBP1Q8TBC3 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHKBP1Q8TBC3 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SHKBP1Q8TBC3 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHKBP1Q8TBC3 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHKBP1Q8TBC3 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
SHKBP1Q8TBC3 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHKBP1Q8TBC3 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.12■□□□□ 0.01
SHKBP1Q8TBC3 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHKBP1Q8TBC3 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHKBP1Q8TBC3 AC018442.1-201ENST00000421439 2061 ntBASIC15.12■□□□□ 0.01
SHKBP1Q8TBC3 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHKBP1Q8TBC3 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
SHKBP1Q8TBC3 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.12■□□□□ 0.01
SHKBP1Q8TBC3 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.12■□□□□ 0.01
SHKBP1Q8TBC3 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHKBP1Q8TBC3 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC15.12■□□□□ 0.01
SHKBP1Q8TBC3 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHKBP1Q8TBC3 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SHKBP1Q8TBC3 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC15.12■□□□□ 0.01
SHKBP1Q8TBC3 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC15.12■□□□□ 0.01
SHKBP1Q8TBC3 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC15.12■□□□□ 0.01
SHKBP1Q8TBC3 AP002803.1-201ENST00000528836 498 ntBASIC15.12■□□□□ 0.01
SHKBP1Q8TBC3 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SHKBP1Q8TBC3 AL031713.1-201ENST00000564813 661 ntBASIC15.12■□□□□ 0.01
SHKBP1Q8TBC3 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC15.12■□□□□ 0.01
SHKBP1Q8TBC3 MIR4750-201ENST00000584564 56 ntBASIC15.12■□□□□ 0.01
SHKBP1Q8TBC3 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC15.12■□□□□ 0.01
SHKBP1Q8TBC3 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHKBP1Q8TBC3 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
SHKBP1Q8TBC3 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHKBP1Q8TBC3 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
SHKBP1Q8TBC3 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHKBP1Q8TBC3 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SHKBP1Q8TBC3 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHKBP1Q8TBC3 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.12■□□□□ 0.01
SHKBP1Q8TBC3 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC15.12■□□□□ 0.01
SHKBP1Q8TBC3 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SHKBP1Q8TBC3 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHKBP1Q8TBC3 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.12■□□□□ 0.01
SHKBP1Q8TBC3 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.12■□□□□ 0.01
SHKBP1Q8TBC3 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC15.12■□□□□ 0.01
SHKBP1Q8TBC3 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC15.12■□□□□ 0.01
SHKBP1Q8TBC3 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHKBP1Q8TBC3 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 AP002353.1-201ENST00000528257 1599 ntBASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 NAGK-204ENST00000443872 878 ntTSL 3 BASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 RN7SL8P-201ENST00000461771 266 ntBASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 AC114947.1-202ENST00000514136 344 ntBASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 AC027237.1-201ENST00000560942 655 ntBASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 AC009560.1-201ENST00000620208 434 ntBASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 HSPA7-201ENST00000445535 1927 ntBASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms