Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 LBX2-201ENST00000341396 886 ntTSL 3 BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 AL136309.1-201ENST00000403917 691 ntBASIC9.61□□□□□ -0.87
SYCNQ0VAF6 PTPA-215ENST00000432124 567 ntTSL 4 BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 AP005018.1-201ENST00000525475 301 ntBASIC9.61□□□□□ -0.87
SYCNQ0VAF6 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 AC078819.1-201ENST00000547454 765 ntBASIC9.61□□□□□ -0.87
SYCNQ0VAF6 AC012085.1-201ENST00000548270 765 ntBASIC9.61□□□□□ -0.87
SYCNQ0VAF6 KRT90P-201ENST00000549264 1064 ntBASIC9.61□□□□□ -0.87
SYCNQ0VAF6 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 AC005586.2-201ENST00000563946 837 ntBASIC9.61□□□□□ -0.87
SYCNQ0VAF6 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 MIR3197-201ENST00000582241 73 ntBASIC9.61□□□□□ -0.87
SYCNQ0VAF6 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 CECR7-204ENST00000609932 568 ntTSL 2 BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 ZACNP1-201ENST00000612259 710 ntBASIC9.61□□□□□ -0.87
SYCNQ0VAF6 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 AC027601.3-201ENST00000622907 509 ntBASIC9.61□□□□□ -0.87
SYCNQ0VAF6 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 MST1P2-201ENST00000457982 2291 ntBASIC9.61□□□□□ -0.87
SYCNQ0VAF6 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC9.61□□□□□ -0.87
SYCNQ0VAF6 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC9.6□□□□□ -0.87
SYCNQ0VAF6 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SYCNQ0VAF6 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
SYCNQ0VAF6 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC9.6□□□□□ -0.87
SYCNQ0VAF6 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC9.6□□□□□ -0.87
SYCNQ0VAF6 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC9.6□□□□□ -0.87
SYCNQ0VAF6 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC9.6□□□□□ -0.87
SYCNQ0VAF6 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SYCNQ0VAF6 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SYCNQ0VAF6 AHCYP2-201ENST00000430630 1300 ntBASIC9.6□□□□□ -0.87
SYCNQ0VAF6 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SYCNQ0VAF6 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SYCNQ0VAF6 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SYCNQ0VAF6 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SYCNQ0VAF6 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC9.6□□□□□ -0.87
SYCNQ0VAF6 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
SYCNQ0VAF6 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SYCNQ0VAF6 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SYCNQ0VAF6 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC9.6□□□□□ -0.87
SYCNQ0VAF6 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SYCNQ0VAF6 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
SYCNQ0VAF6 USP47-202ENST00000339865 7775 ntTSL 2 BASIC9.6□□□□□ -0.87
SYCNQ0VAF6 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SYCNQ0VAF6 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SYCNQ0VAF6 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC9.6□□□□□ -0.87
SYCNQ0VAF6 HARS-202ENST00000415192 1401 ntTSL 2 BASIC9.6□□□□□ -0.87
SYCNQ0VAF6 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SYCNQ0VAF6 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SYCNQ0VAF6 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC9.6□□□□□ -0.87
SYCNQ0VAF6 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SYCNQ0VAF6 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC9.6□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms